| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is katE [H]
Identifier: 209549068
GI number: 209549068
Start: 1492206
End: 1494320
Strand: Reverse
Name: katE [H]
Synonym: Rleg2_1465
Alternate gene names: 209549068
Gene position: 1494320-1492206 (Counterclockwise)
Preceding gene: 209549069
Following gene: 209549066
Centisome position: 32.93
GC content: 59.53
Gene sequence:
>2115_bases ATGGCCAAGAAGACGAAGACCTCGCCCTCGGACAACGCGACGATTCATGATCAGAAACTGCACCGCGGCGCAGGCGGTGA GTTGCATCAGCTTGCCGAGGACGGCATGCCGGTGCTGACCACAGCACAAGGCGGCCCCGTTTCCGACGATCAGAATACGC TTCGTCTCGGCGCCCGCGGCCCCGCCCTCATCGATGACTTCCATTTTCGCGAGAAGATCTTTCATTTCGACCACGAGCGC ATTCCCGAACGGGTCGTGCATGCGCGCGGTTACGGCGCCCATGGCTATTTCGAAACCTATGAATCGCTGGCCGCCTATAC CCGGGCCGACCTTTTCCAGCGGCCCGGCGAAAAGACGCCGGCCTTCGTGCGGTTTTCGACAGTCGCCGGCAGCAAGGGGT CCTTCGATCTGGCGCGCGACGTGCGCGGTTTCGCGGTGAAGCTCTACACGCAGCAGGGTAATTGGGATCTGGTCGGCAAT AACATTCCCGTCTTCTTCATTCAGGAGGCGATCAAATTTCCCGACCTCGTCCATTCCGTAAAGCCGGAACCCGACAGGCA ATTTCCGCAGGCGCAGTCTGCGCATGACAATTTCTGGGACTTCATCTCCCTCACCCCGGAAAGCATGCATATGATCATGT GGGTCATGTCGGATCGCGCCATCCCGCGCTCCTTCCGTTTCATGGAGGGGTTTGGCGTTCACACCTTCCGCTTCGTCAAC GCGGCCGATGAATCGACCTTCGTCAAATTTCATTGGAAACCGAAACTCGGCCTGCAATCCGTCGCCTGGAACGAGGCGGT CAAGATAAACGGTGCGGATCCGGACTTCCATCGCCGCGACCTCTGGCAGTCGATCCAGTCAGGAAACTTCCCGGAATGGG AGCTCTGTGTGCAGCTTTTCGATCAGGACTTCGCCGACACGTTCGACTTCGACATCCTCGATCCGACGAAGATCATTCCC GAGGAGATCCTGCCGGTCAAACCGATCGGCCGTCTGGTGCTCGACCGAATGCCCGAGAACTTTTTCGCCGAGACCGAGCA GGTCGCCTTCATGACGCAGAACGTTCCACCCGGCATCGACTTCAGCAACGACCCGCTTCTGCAGGGTCGGAACTTCTCCT ATCTCGACACGCAGCTGAAACGTCTGGGCGGCCCGAATTTCACCCACCTGCCGATTAACGCTCCGAAATGTCCCTTCCAC AATTTCCAGCAGGATGGCCACATGGCGATGCGCAATCCTGTCGGACGGGTCAATTACCAGCCGAACTCCTGGAATCAGGG ACCGCGAGAATCGCCGGTTCAGGGCTATCGTCACTTCCCGGCCGAGGAGCAGGGTACCAAGGTCCGGTTGCGGCCGGAAA GCTTTGCCGATCATTACAGCCAGGCCAGGCAGTTCTTCATCAGTCAGACTGCGCCGGAGCAACGCCATATCGCAGCAGCG CTGACCTTCGAATTGAGCAAGGTCGAAACACCGGTCATTCGCGAGCGCATGGTCTCGCATCTCATGAACATCGATGAGAC TTTGGCCAGCAAGGTCGGCCACGCACTCGGCTTCAAATCGATGCCGAAGCCTGCCGATGCCGCCATGCCGACGCGCCAGG ATCTCGAGCCGTCGCCGGCGCTCAGCATTATCGAACGTGGTCCGAAGCGGTTCGAAGGACGCAAGCTCGGTATTCTTGTC ACCGACGGCAGCGACGCCGCGATATTCAAGGCGCTGCTTGCCGAGATCACCGAGCAGAAGGCAACATTCGAAGTGATCGC GCCAAAGATCGGCGGCGTGACGCTCTCGGACGGCAATTGGATCGAGGCGCATCAGATGATCGACGGCGGACCTTCGGTGC TTTACGACGCCGTCGCGCTGCTGCCCTCGTCGGCGGGAAGCAGCGACCTGCTAAAGGAGGCAACGGCCCATGACTTCGTG TCGGATGCCTTCGTGCACTGCAAGTTCATCGGCTATGTGGAAACAGCGCTGCCCCTCATGCAGAAGGCCGGAATTGCCGA TTCCCTGGATGAGGGCGTGCTTGCGCTTAGAGCGGCCGGGGATGTCGCGGCCTTTGTCAAAGCGCTTGGAAAACTGCGTG TCTGGGGCCGCGAACCGTCGGTCAAACTGAATTGA
Upstream 100 bases:
>100_bases AAACGCAGCCCTTCGCCAGGTTGCAGTTTATTTCGCGGCGAGCGGAACATGTCGCCATTTTTGAGCTTCGGTTAGGTCAC ACCCTTTCCGGAGAAGATAG
Downstream 100 bases:
>100_bases ACTTAGGGTGGCCATGAGAATGGCTCGTCGTCTAAAACCCGCGGAAACGCGGGTTTTAAACTGTTCGCAGCACGTGATGT ATTGAGCCTGGATGATGGAA
Product: catalase
Products: NA
Alternate protein names: KAT2 [H]
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MAKKTKTSPSDNATIHDQKLHRGAGGELHQLAEDGMPVLTTAQGGPVSDDQNTLRLGARGPALIDDFHFREKIFHFDHER IPERVVHARGYGAHGYFETYESLAAYTRADLFQRPGEKTPAFVRFSTVAGSKGSFDLARDVRGFAVKLYTQQGNWDLVGN NIPVFFIQEAIKFPDLVHSVKPEPDRQFPQAQSAHDNFWDFISLTPESMHMIMWVMSDRAIPRSFRFMEGFGVHTFRFVN AADESTFVKFHWKPKLGLQSVAWNEAVKINGADPDFHRRDLWQSIQSGNFPEWELCVQLFDQDFADTFDFDILDPTKIIP EEILPVKPIGRLVLDRMPENFFAETEQVAFMTQNVPPGIDFSNDPLLQGRNFSYLDTQLKRLGGPNFTHLPINAPKCPFH NFQQDGHMAMRNPVGRVNYQPNSWNQGPRESPVQGYRHFPAEEQGTKVRLRPESFADHYSQARQFFISQTAPEQRHIAAA LTFELSKVETPVIRERMVSHLMNIDETLASKVGHALGFKSMPKPADAAMPTRQDLEPSPALSIIERGPKRFEGRKLGILV TDGSDAAIFKALLAEITEQKATFEVIAPKIGGVTLSDGNWIEAHQMIDGGPSVLYDAVALLPSSAGSSDLLKEATAHDFV SDAFVHCKFIGYVETALPLMQKAGIADSLDEGVLALRAAGDVAAFVKALGKLRVWGREPSVKLN
Sequences:
>Translated_704_residues MAKKTKTSPSDNATIHDQKLHRGAGGELHQLAEDGMPVLTTAQGGPVSDDQNTLRLGARGPALIDDFHFREKIFHFDHER IPERVVHARGYGAHGYFETYESLAAYTRADLFQRPGEKTPAFVRFSTVAGSKGSFDLARDVRGFAVKLYTQQGNWDLVGN NIPVFFIQEAIKFPDLVHSVKPEPDRQFPQAQSAHDNFWDFISLTPESMHMIMWVMSDRAIPRSFRFMEGFGVHTFRFVN AADESTFVKFHWKPKLGLQSVAWNEAVKINGADPDFHRRDLWQSIQSGNFPEWELCVQLFDQDFADTFDFDILDPTKIIP EEILPVKPIGRLVLDRMPENFFAETEQVAFMTQNVPPGIDFSNDPLLQGRNFSYLDTQLKRLGGPNFTHLPINAPKCPFH NFQQDGHMAMRNPVGRVNYQPNSWNQGPRESPVQGYRHFPAEEQGTKVRLRPESFADHYSQARQFFISQTAPEQRHIAAA LTFELSKVETPVIRERMVSHLMNIDETLASKVGHALGFKSMPKPADAAMPTRQDLEPSPALSIIERGPKRFEGRKLGILV TDGSDAAIFKALLAEITEQKATFEVIAPKIGGVTLSDGNWIEAHQMIDGGPSVLYDAVALLPSSAGSSDLLKEATAHDFV SDAFVHCKFIGYVETALPLMQKAGIADSLDEGVLALRAAGDVAAFVKALGKLRVWGREPSVKLN >Mature_703_residues AKKTKTSPSDNATIHDQKLHRGAGGELHQLAEDGMPVLTTAQGGPVSDDQNTLRLGARGPALIDDFHFREKIFHFDHERI PERVVHARGYGAHGYFETYESLAAYTRADLFQRPGEKTPAFVRFSTVAGSKGSFDLARDVRGFAVKLYTQQGNWDLVGNN IPVFFIQEAIKFPDLVHSVKPEPDRQFPQAQSAHDNFWDFISLTPESMHMIMWVMSDRAIPRSFRFMEGFGVHTFRFVNA ADESTFVKFHWKPKLGLQSVAWNEAVKINGADPDFHRRDLWQSIQSGNFPEWELCVQLFDQDFADTFDFDILDPTKIIPE EILPVKPIGRLVLDRMPENFFAETEQVAFMTQNVPPGIDFSNDPLLQGRNFSYLDTQLKRLGGPNFTHLPINAPKCPFHN FQQDGHMAMRNPVGRVNYQPNSWNQGPRESPVQGYRHFPAEEQGTKVRLRPESFADHYSQARQFFISQTAPEQRHIAAAL TFELSKVETPVIRERMVSHLMNIDETLASKVGHALGFKSMPKPADAAMPTRQDLEPSPALSIIERGPKRFEGRKLGILVT DGSDAAIFKALLAEITEQKATFEVIAPKIGGVTLSDGNWIEAHQMIDGGPSVLYDAVALLPSSAGSSDLLKEATAHDFVS DAFVHCKFIGYVETALPLMQKAGIADSLDEGVLALRAAGDVAAFVKALGKLRVWGREPSVKLN
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Could protect cells in nodules which have a high potential to produce hydrogen peroxide because of the strong reducing conditions requ
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=501, Percent_Identity=41.9161676646707, Blast_Score=391, Evalue=1e-108, Organism=Escherichia coli, GI48994891, Length=674, Percent_Identity=48.6646884272997, Blast_Score=645, Evalue=0.0, Organism=Caenorhabditis elegans, GI25147792, Length=474, Percent_Identity=41.7721518987342, Blast_Score=372, Evalue=1e-103, Organism=Caenorhabditis elegans, GI25151141, Length=474, Percent_Identity=41.7721518987342, Blast_Score=371, Evalue=1e-103, Organism=Caenorhabditis elegans, GI71998444, Length=479, Percent_Identity=40.9185803757829, Blast_Score=370, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6320462, Length=361, Percent_Identity=40.1662049861496, Blast_Score=291, Evalue=2e-79, Organism=Saccharomyces cerevisiae, GI6321525, Length=373, Percent_Identity=41.0187667560322, Blast_Score=280, Evalue=5e-76, Organism=Drosophila melanogaster, GI17981717, Length=475, Percent_Identity=39.5789473684211, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI19920968, Length=430, Percent_Identity=40.2325581395349, Blast_Score=342, Evalue=6e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 78692; Mature: 78561
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKTKTSPSDNATIHDQKLHRGAGGELHQLAEDGMPVLTTAQGGPVSDDQNTLRLGARG CCCCCCCCCCCCCEEEHHHHHCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCC PALIDDFHFREKIFHFDHERIPERVVHARGYGAHGYFETYESLAAYTRADLFQRPGEKTP CCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC AFVRFSTVAGSKGSFDLARDVRGFAVKLYTQQGNWDLVGNNIPVFFIQEAIKFPDLVHSV CEEEEEEECCCCCCCHHHHCCCCEEEEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHC KPEPDRQFPQAQSAHDNFWDFISLTPESMHMIMWVMSDRAIPRSFRFMEGFGVHTFRFVN CCCCCCCCCCCCCCCCCCHHHEECCHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEE AADESTFVKFHWKPKLGLQSVAWNEAVKINGADPDFHRRDLWQSIQSGNFPEWELCVQLF CCCCCCEEEEEECCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH DQDFADTFDFDILDPTKIIPEEILPVKPIGRLVLDRMPENFFAETEQVAFMTQNVPPGID HHHHHHHCCCCCCCCHHHCHHHCCCCCHHHHHHHHHCCHHHHHCCHHHEEEECCCCCCCC FSNDPLLQGRNFSYLDTQLKRLGGPNFTHLPINAPKCPFHNFQQDGHMAMRNPVGRVNYQ CCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHCCCCCEEEC PNSWNQGPRESPVQGYRHFPAEEQGTKVRLRPESFADHYSQARQFFISQTAPEQRHIAAA CCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHEEHH LTFELSKVETPVIRERMVSHLMNIDETLASKVGHALGFKSMPKPADAAMPTRQDLEPSPA EEEEHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH LSIIERGPKRFEGRKLGILVTDGSDAAIFKALLAEITEQKATFEVIAPKIGGVTLSDGNW HHHHHCCHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCEEEEECCCCCCEEECCCCE IEAHQMIDGGPSVLYDAVALLPSSAGSSDLLKEATAHDFVSDAFVHCKFIGYVETALPLM EEHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKAGIADSLDEGVLALRAAGDVAAFVKALGKLRVWGREPSVKLN HHCCCCCHHHCCCEEEHHHHHHHHHHHHHHHEEEECCCCCCCCC >Mature Secondary Structure AKKTKTSPSDNATIHDQKLHRGAGGELHQLAEDGMPVLTTAQGGPVSDDQNTLRLGARG CCCCCCCCCCCCEEEHHHHHCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCC PALIDDFHFREKIFHFDHERIPERVVHARGYGAHGYFETYESLAAYTRADLFQRPGEKTP CCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC AFVRFSTVAGSKGSFDLARDVRGFAVKLYTQQGNWDLVGNNIPVFFIQEAIKFPDLVHSV CEEEEEEECCCCCCCHHHHCCCCEEEEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHC KPEPDRQFPQAQSAHDNFWDFISLTPESMHMIMWVMSDRAIPRSFRFMEGFGVHTFRFVN CCCCCCCCCCCCCCCCCCHHHEECCHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEE AADESTFVKFHWKPKLGLQSVAWNEAVKINGADPDFHRRDLWQSIQSGNFPEWELCVQLF CCCCCCEEEEEECCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH DQDFADTFDFDILDPTKIIPEEILPVKPIGRLVLDRMPENFFAETEQVAFMTQNVPPGID HHHHHHHCCCCCCCCHHHCHHHCCCCCHHHHHHHHHCCHHHHHCCHHHEEEECCCCCCCC FSNDPLLQGRNFSYLDTQLKRLGGPNFTHLPINAPKCPFHNFQQDGHMAMRNPVGRVNYQ CCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHCCCCCEEEC PNSWNQGPRESPVQGYRHFPAEEQGTKVRLRPESFADHYSQARQFFISQTAPEQRHIAAA CCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHEEHH LTFELSKVETPVIRERMVSHLMNIDETLASKVGHALGFKSMPKPADAAMPTRQDLEPSPA EEEEHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH LSIIERGPKRFEGRKLGILVTDGSDAAIFKALLAEITEQKATFEVIAPKIGGVTLSDGNW HHHHHCCHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCEEEEECCCCCCEEECCCCE IEAHQMIDGGPSVLYDAVALLPSSAGSSDLLKEATAHDFVSDAFVHCKFIGYVETALPLM EEHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKAGIADSLDEGVLALRAAGDVAAFVKALGKLRVWGREPSVKLN HHCCCCCHHHCCCEEEHHHHHHHHHHHHHHHEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10198032; 11481431 [H]