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The map label for this gene is chrR [H]

Identifier: 209549042

GI number: 209549042

Start: 1463191

End: 1463835

Strand: Direct

Name: chrR [H]

Synonym: Rleg2_1439

Alternate gene names: 209549042

Gene position: 1463191-1463835 (Clockwise)

Preceding gene: 209549036

Following gene: 209549043

Centisome position: 32.24

GC content: 63.72

Gene sequence:

>645_bases
ATGATTCACGAGCAGATCGACACGATCGATGCATTGATGGCGCATTATGTCGCCGGTTCCTTGCCCGAGCCGGCGCGGGT
GCTGGTACGATCCCATCTCGAAATGAAGGCCGACAATCGCCGCCTGGTGGACAGCCTCGAATTGCTGGCCGGGGAGGCGC
TGGAAAGCGCTGCTGAAACCGCCATTGCCGACCGCGACCGGCAGCTTCAGGCAATCTTTTCCTCTGCCGCTCCGGTCGCA
GCGCCGCAGGCGGCCAGGCGGCCGGAAAACGCGCTGTTTCCACAAGCGCTGCGCGATTTCGTCGGCTTCGAGGTCGAGGA
CGTGCCGTGGCGCAAGCGGTTGCCGGGTTTCAAGGAATATTCCCTCGAACTCGACGGCTGCGAGGTCAACCTGATGTGGA
TCCGCCCGGGCCGCGCTTTGCCGGCGCACACCCACAAAGGCATGGAACTGATCCTCATCCTCGACGGCGCCTTCAACGAT
GAACGCGGCCGTTTCGGCCCCGGCGACATCTCCATTGCCGACGAGACGGTCGACCATCGGCCGGTCGCCGAAAAGGACAG
GCCCTGCATCGCCTTTGCCGTTTCGGACGGGCCGGTGAAGCTCACCGGATCCCTTCGTCAGATGATCGGCGACCTGATCG
GCTGA

Upstream 100 bases:

>100_bases
AATCCCGCCATGCGTGGGGTGATCCGAAGATTGACTTTCCCCGTACGGATGACGACAAAGCGAAAACGGAGCGCGGCAAC
AGGGCGTGACCGAAACCGGT

Downstream 100 bases:

>100_bases
AAGCAGCCACAATGGTGTGATAGAGCCGTAAATCCGGGAGGCGAAGGGAACTTTCCGGACTTGTTTTCGGTTGGTCAGGC
AGAACCGGAGGAACATGTCA

Product: anti-ECF sigma factor ChrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MIHEQIDTIDALMAHYVAGSLPEPARVLVRSHLEMKADNRRLVDSLELLAGEALESAAETAIADRDRQLQAIFSSAAPVA
APQAARRPENALFPQALRDFVGFEVEDVPWRKRLPGFKEYSLELDGCEVNLMWIRPGRALPAHTHKGMELILILDGAFND
ERGRFGPGDISIADETVDHRPVAEKDRPCIAFAVSDGPVKLTGSLRQMIGDLIG

Sequences:

>Translated_214_residues
MIHEQIDTIDALMAHYVAGSLPEPARVLVRSHLEMKADNRRLVDSLELLAGEALESAAETAIADRDRQLQAIFSSAAPVA
APQAARRPENALFPQALRDFVGFEVEDVPWRKRLPGFKEYSLELDGCEVNLMWIRPGRALPAHTHKGMELILILDGAFND
ERGRFGPGDISIADETVDHRPVAEKDRPCIAFAVSDGPVKLTGSLRQMIGDLIG
>Mature_214_residues
MIHEQIDTIDALMAHYVAGSLPEPARVLVRSHLEMKADNRRLVDSLELLAGEALESAAETAIADRDRQLQAIFSSAAPVA
APQAARRPENALFPQALRDFVGFEVEDVPWRKRLPGFKEYSLELDGCEVNLMWIRPGRALPAHTHKGMELILILDGAFND
ERGRFGPGDISIADETVDHRPVAEKDRPCIAFAVSDGPVKLTGSLRQMIGDLIG

Specific function: Anti-sigma factor that inhibits the activity of the extracytoplasmic function (ECF) sigma (E) factor, thereby indirectly regulating the transcription of the cycA and rpoE genes [H]

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012807
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23541; Mature: 23541

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHEQIDTIDALMAHYVAGSLPEPARVLVRSHLEMKADNRRLVDSLELLAGEALESAAET
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AIADRDRQLQAIFSSAAPVAAPQAARRPENALFPQALRDFVGFEVEDVPWRKRLPGFKEY
HHHHCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCE
SLELDGCEVNLMWIRPGRALPAHTHKGMELILILDGAFNDERGRFGPGDISIADETVDHR
EEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCCC
PVAEKDRPCIAFAVSDGPVKLTGSLRQMIGDLIG
CCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MIHEQIDTIDALMAHYVAGSLPEPARVLVRSHLEMKADNRRLVDSLELLAGEALESAAET
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AIADRDRQLQAIFSSAAPVAAPQAARRPENALFPQALRDFVGFEVEDVPWRKRLPGFKEY
HHHHCHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCE
SLELDGCEVNLMWIRPGRALPAHTHKGMELILILDGAFNDERGRFGPGDISIADETVDHR
EEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCCC
PVAEKDRPCIAFAVSDGPVKLTGSLRQMIGDLIG
CCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721683 [H]