Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

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The map label for this gene is 209548981

Identifier: 209548981

GI number: 209548981

Start: 1398742

End: 1400004

Strand: Direct

Name: 209548981

Synonym: Rleg2_1378

Alternate gene names: NA

Gene position: 1398742-1400004 (Clockwise)

Preceding gene: 209548980

Following gene: 209548982

Centisome position: 30.82

GC content: 62.23

Gene sequence:

>1263_bases
ATGAATAGGTTTTTGACCACGACGGCGATGATCGCATTGGCTCTGGCCGGCGCGCATGTCTCCGCCCGCGGAGCCGACGT
GAAGGAAGTTCAGATGCTGCATTGGTGGACGTCTGGCGGCGAGGCGGCGGCTTTGAACGTGCTGAAGCAGGATCTGTCGA
AGGAAGGTTTTGCCTGGAAGGACGTTCCAGTGGCCGGCGGCGGCGGTGATGCGGCGATGACGGCACTGAAGGCGATGGTT
GCGGCCGGCACCTATCCGACGGCCTCGCAGATGCTGGGCTATACCGTGCTCGATTATGCCCAGGCCGGCGTCATGGGCGA
CCTGACCGAGACGGCGAAGAAGGAAGGCTGGGACAAGTCGGTGCCGGCGGCGCTGCAGAAGTTCTCGGTCTATGACGGCA
AGTGGGTCGCAGCCCCTGTTAACGTGCACTCGGTCAACTGGCTGTGGATCAACAAGGCGGTGATGGACAAGATCGGCGGC
ACCCAGCCGAAGACCTTCGACGATCTGATCGCGCTGCTCGACAAGGCCAAGGCCGCAGGTGTCATCCCCTTGGCGCTCGG
CGGTCAGAACTGGCAGGAAGCGACGATGTTCGATTCCATCGTGCTGTCGACCGGCGGGCCGGAATTCTACAAGAAGGCCT
TCAACGATCTCGATGAGGAGTCGCTGAAGTCGGACACGATGAAGAAGTCCTTCGACAATCTGGCGACGATCATCAAATAT
GTCGATCCGAACTTCTCCGGCCGCGACTGGAACCTGGCGACCGCCATGGTCATCAAGGGTGATGCGCTGGTGCAGGTGAT
GGGCGACTGGGCCAAGGGCGAATTCGTCGCCGCCAAGAAGACCCCGGATACCGACTTCCTCTGCTACCGCTTCCCCGGCA
CCGAAGGCAGCGTCGTCTATAACTCCGACATGTTCGGCATGTTCAACGTTCCCGATGACCGCAAGGCCGCTCAGGTGGCG
CTGGCAACCGCGACGCTGTCGAAGAGCTTCCAGTCGGCCTTCAACGTCGTCAAGGGTTCGGTGCCGGCCCGCACCGACGT
TCCCGACACCGACTTCGATGCCTGCGGCAAGAAGGGCATCGCCGATCTGAAGGCGGCCAATGAGGGCGGCACGCTGTTCG
GCTCGCTGGCCCAGGGCTATGGCGCGCCTCCGGCCATCGCCAATGCCTATAAGGACGTGGTCTCGAAGTTCGTCCACGGC
CAGATCAAGAGCTCCGACGAAGCCGTCAAGCAGCTCGTCCAGGCGATCGACGACGCTCGCTGA

Upstream 100 bases:

>100_bases
AAGCCGGCTTAGCCGGCGAGGAAACTACGCCCGAGGAGGGCGGGTGATCGGATGCGGGAATGGTCCCGCATCTTCCAAGA
GGGAACTGGGAGGTTCTTCG

Downstream 100 bases:

>100_bases
GATCAGCCGATGACAACGCTTCCCCACGCATGTCGTGGGGAAGCTTCAGGCTCCGCGACGATCAGGCGGGGACGATCGGG
CAGGGCCGATCATGCGGGAA

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MNRFLTTTAMIALALAGAHVSARGADVKEVQMLHWWTSGGEAAALNVLKQDLSKEGFAWKDVPVAGGGGDAAMTALKAMV
AAGTYPTASQMLGYTVLDYAQAGVMGDLTETAKKEGWDKSVPAALQKFSVYDGKWVAAPVNVHSVNWLWINKAVMDKIGG
TQPKTFDDLIALLDKAKAAGVIPLALGGQNWQEATMFDSIVLSTGGPEFYKKAFNDLDEESLKSDTMKKSFDNLATIIKY
VDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFVAAKKTPDTDFLCYRFPGTEGSVVYNSDMFGMFNVPDDRKAAQVA
LATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKAANEGGTLFGSLAQGYGAPPAIANAYKDVVSKFVHG
QIKSSDEAVKQLVQAIDDAR

Sequences:

>Translated_420_residues
MNRFLTTTAMIALALAGAHVSARGADVKEVQMLHWWTSGGEAAALNVLKQDLSKEGFAWKDVPVAGGGGDAAMTALKAMV
AAGTYPTASQMLGYTVLDYAQAGVMGDLTETAKKEGWDKSVPAALQKFSVYDGKWVAAPVNVHSVNWLWINKAVMDKIGG
TQPKTFDDLIALLDKAKAAGVIPLALGGQNWQEATMFDSIVLSTGGPEFYKKAFNDLDEESLKSDTMKKSFDNLATIIKY
VDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFVAAKKTPDTDFLCYRFPGTEGSVVYNSDMFGMFNVPDDRKAAQVA
LATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKAANEGGTLFGSLAQGYGAPPAIANAYKDVVSKFVHG
QIKSSDEAVKQLVQAIDDAR
>Mature_420_residues
MNRFLTTTAMIALALAGAHVSARGADVKEVQMLHWWTSGGEAAALNVLKQDLSKEGFAWKDVPVAGGGGDAAMTALKAMV
AAGTYPTASQMLGYTVLDYAQAGVMGDLTETAKKEGWDKSVPAALQKFSVYDGKWVAAPVNVHSVNWLWINKAVMDKIGG
TQPKTFDDLIALLDKAKAAGVIPLALGGQNWQEATMFDSIVLSTGGPEFYKKAFNDLDEESLKSDTMKKSFDNLATIIKY
VDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFVAAKKTPDTDFLCYRFPGTEGSVVYNSDMFGMFNVPDDRKAAQVA
LATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKAANEGGTLFGSLAQGYGAPPAIANAYKDVVSKFVHG
QIKSSDEAVKQLVQAIDDAR

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44787; Mature: 44787

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFLTTTAMIALALAGAHVSARGADVKEVQMLHWWTSGGEAAALNVLKQDLSKEGFAWK
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
DVPVAGGGGDAAMTALKAMVAAGTYPTASQMLGYTVLDYAQAGVMGDLTETAKKEGWDKS
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCH
VPAALQKFSVYDGKWVAAPVNVHSVNWLWINKAVMDKIGGTQPKTFDDLIALLDKAKAAG
HHHHHHHHHCCCCCEEEEECEEEEEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
VIPLALGGQNWQEATMFDSIVLSTGGPEFYKKAFNDLDEESLKSDTMKKSFDNLATIIKY
EEEEEECCCCCHHHHHHHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFVAAKKTPDTDFLCYRFPGTEGSVVY
HCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCEEE
NSDMFGMFNVPDDRKAAQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGI
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC
ADLKAANEGGTLFGSLAQGYGAPPAIANAYKDVVSKFVHGQIKSSDEAVKQLVQAIDDAR
HHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRFLTTTAMIALALAGAHVSARGADVKEVQMLHWWTSGGEAAALNVLKQDLSKEGFAWK
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
DVPVAGGGGDAAMTALKAMVAAGTYPTASQMLGYTVLDYAQAGVMGDLTETAKKEGWDKS
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCH
VPAALQKFSVYDGKWVAAPVNVHSVNWLWINKAVMDKIGGTQPKTFDDLIALLDKAKAAG
HHHHHHHHHCCCCCEEEEECEEEEEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
VIPLALGGQNWQEATMFDSIVLSTGGPEFYKKAFNDLDEESLKSDTMKKSFDNLATIIKY
EEEEEECCCCCHHHHHHHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFVAAKKTPDTDFLCYRFPGTEGSVVY
HCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCEEE
NSDMFGMFNVPDDRKAAQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGI
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC
ADLKAANEGGTLFGSLAQGYGAPPAIANAYKDVVSKFVHGQIKSSDEAVKQLVQAIDDAR
HHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]