Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

Click here to switch to the map view.

The map label for this gene is 209548821

Identifier: 209548821

GI number: 209548821

Start: 1229401

End: 1230735

Strand: Direct

Name: 209548821

Synonym: Rleg2_1218

Alternate gene names: NA

Gene position: 1229401-1230735 (Clockwise)

Preceding gene: 209548819

Following gene: 209548822

Centisome position: 27.09

GC content: 58.43

Gene sequence:

>1335_bases
ATGAACAGAACCGTGAAATCGATCAGCATACTGCCGGCATACCGATTGAAAGCAGCTGTCGCGCTTGCCGGCGCGGCGCT
TTTGAGTTTCGGCCTTTCCGCCGCCCGGGCCGACGATCTGGCCGTGTGGGATGACCAGACCTTCGAAGGCCAGAGCGCGG
TCATCGAGCAACTGAATAAGGATTTCGAAGCCGCGCATCCCGGTGTCACGATCAAACGCACCGCGCGCACTTTCGATGAC
ATGAAGCTGACGCTGAAGCTTGCAGTTTCGGCAGGTGATGGCCCCGTCATCACCAAGGTCAACCAGGGCGCCGGCGACAT
GGGCGCGATGGTCAAGGAAGGCTTGCTCCTGCCGGTCGACGAATACATCAAGAAATATGGTTGGGATAAGCGGCAGTCGG
ATTCCGTGCTGGCCAGAGACCGCTGGGAGGGCGCGAAATTCGGGGTCGGCAAGACCTACGGCATATCGGGTCTCGGCGAG
ATCGTCGGCCTCTACTACAATAAGAAGATCCTCGACGACGCGGGCGTGGCGCTGCCGCAGACCTTCGAGGAACTGTTGGC
CGATCTCGACAAGCTGAAGGAAAAAGGCGTTGCGCCCTTCATGATGGGCTCCGCCAAGCAGCATCTTGCCCTGCATATGA
TCGGCGCTATCGATCAAGCGCATATCGACGCGGCCAATCGCGCCGAGCTTGACGACCTGATCTACGGCAAGGGCGGTTCC
TGGAACACCAAAGGCAACATCGAATCAGCCAAACTCGTGCAGAAATGGGCACAGGGCGGCTATTTCTACCCCGGTTTCGA
GGGCATCTCGGGTGACGACGCCGTCCAGCTGTTCATATCAGGGCAGGGCGCATTTCTGATCTCCGGAACCTGGTACTTTG
GCGACATGCAAAACAATCCGGATATCGGCTTCATGGCCATTCCCGCGCCGAAGGGTGTCGCCAAACCCATGAGCGTCGGC
GGTGTGGATCTTGCCTGGGCGATAACCAGCCTTGCCAAAGACAAGGCGAAGCAGGATCTGGCCGGCGAGTACATCGACTA
TATGGTGTCCGAAAAGGCCGCTGAAAGCTGGGCCGCTGCAGGCTATCTTCCTGCAACGTCGCTCCCGGCGGATGCAAAGC
CCAAGCTGACGCCGCTCCTGACTTCCGGCATCGAGATGTGGAAGACACTCAACGCCAACGATGCGCTCGGCCATTACCCC
GATTGGTCGAGCCCGACGATGCTGAAGACAATCGACGACAACACGCCACTTCTCCTGTCCGGCAAGATCACGCCCGAAGC
CTTTGTCGATGCCATGGACAAGGATTATCAGGCCTATTTGAAGGATCAGAAATAA

Upstream 100 bases:

>100_bases
TTCGCCGACCAGGCAAAGCTCTGGGGGAAGAAAACGTTCGGCCGGCGCCAGGTGCGAGGCCCGGACGGGGAGTGGAGAAT
AAACCAATGAGGTGGAGCAG

Downstream 100 bases:

>100_bases
GAAGTGCGGACGCCGGTCACGACCGCTCGTGAGCGGTTCGACCGGCGTCCTATCCATCACATTAAAATGAGCGCGGCGAG
CTGACGGCTTGCGGCGCGAT

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: Sugar ABC Transporter; Male-Type Abc Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNRTVKSISILPAYRLKAAVALAGAALLSFGLSAARADDLAVWDDQTFEGQSAVIEQLNKDFEAAHPGVTIKRTARTFDD
MKLTLKLAVSAGDGPVITKVNQGAGDMGAMVKEGLLLPVDEYIKKYGWDKRQSDSVLARDRWEGAKFGVGKTYGISGLGE
IVGLYYNKKILDDAGVALPQTFEELLADLDKLKEKGVAPFMMGSAKQHLALHMIGAIDQAHIDAANRAELDDLIYGKGGS
WNTKGNIESAKLVQKWAQGGYFYPGFEGISGDDAVQLFISGQGAFLISGTWYFGDMQNNPDIGFMAIPAPKGVAKPMSVG
GVDLAWAITSLAKDKAKQDLAGEYIDYMVSEKAAESWAAAGYLPATSLPADAKPKLTPLLTSGIEMWKTLNANDALGHYP
DWSSPTMLKTIDDNTPLLLSGKITPEAFVDAMDKDYQAYLKDQK

Sequences:

>Translated_444_residues
MNRTVKSISILPAYRLKAAVALAGAALLSFGLSAARADDLAVWDDQTFEGQSAVIEQLNKDFEAAHPGVTIKRTARTFDD
MKLTLKLAVSAGDGPVITKVNQGAGDMGAMVKEGLLLPVDEYIKKYGWDKRQSDSVLARDRWEGAKFGVGKTYGISGLGE
IVGLYYNKKILDDAGVALPQTFEELLADLDKLKEKGVAPFMMGSAKQHLALHMIGAIDQAHIDAANRAELDDLIYGKGGS
WNTKGNIESAKLVQKWAQGGYFYPGFEGISGDDAVQLFISGQGAFLISGTWYFGDMQNNPDIGFMAIPAPKGVAKPMSVG
GVDLAWAITSLAKDKAKQDLAGEYIDYMVSEKAAESWAAAGYLPATSLPADAKPKLTPLLTSGIEMWKTLNANDALGHYP
DWSSPTMLKTIDDNTPLLLSGKITPEAFVDAMDKDYQAYLKDQK
>Mature_444_residues
MNRTVKSISILPAYRLKAAVALAGAALLSFGLSAARADDLAVWDDQTFEGQSAVIEQLNKDFEAAHPGVTIKRTARTFDD
MKLTLKLAVSAGDGPVITKVNQGAGDMGAMVKEGLLLPVDEYIKKYGWDKRQSDSVLARDRWEGAKFGVGKTYGISGLGE
IVGLYYNKKILDDAGVALPQTFEELLADLDKLKEKGVAPFMMGSAKQHLALHMIGAIDQAHIDAANRAELDDLIYGKGGS
WNTKGNIESAKLVQKWAQGGYFYPGFEGISGDDAVQLFISGQGAFLISGTWYFGDMQNNPDIGFMAIPAPKGVAKPMSVG
GVDLAWAITSLAKDKAKQDLAGEYIDYMVSEKAAESWAAAGYLPATSLPADAKPKLTPLLTSGIEMWKTLNANDALGHYP
DWSSPTMLKTIDDNTPLLLSGKITPEAFVDAMDKDYQAYLKDQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47847; Mature: 47847

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTVKSISILPAYRLKAAVALAGAALLSFGLSAARADDLAVWDDQTFEGQSAVIEQLNK
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCHHHHHHHHHH
DFEAAHPGVTIKRTARTFDDMKLTLKLAVSAGDGPVITKVNQGAGDMGAMVKEGLLLPVD
HHHHCCCCEEEEHHHHHHCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCHH
EYIKKYGWDKRQSDSVLARDRWEGAKFGVGKTYGISGLGEIVGLYYNKKILDDAGVALPQ
HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCHH
TFEELLADLDKLKEKGVAPFMMGSAKQHLALHMIGAIDQAHIDAANRAELDDLIYGKGGS
HHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCC
WNTKGNIESAKLVQKWAQGGYFYPGFEGISGDDAVQLFISGQGAFLISGTWYFGDMQNNP
CCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCC
DIGFMAIPAPKGVAKPMSVGGVDLAWAITSLAKDKAKQDLAGEYIDYMVSEKAAESWAAA
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYLPATSLPADAKPKLTPLLTSGIEMWKTLNANDALGHYPDWSSPTMLKTIDDNTPLLLS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE
GKITPEAFVDAMDKDYQAYLKDQK
CCCCHHHHHHHHCHHHHHHHCCCC
>Mature Secondary Structure
MNRTVKSISILPAYRLKAAVALAGAALLSFGLSAARADDLAVWDDQTFEGQSAVIEQLNK
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCHHHHHHHHHH
DFEAAHPGVTIKRTARTFDDMKLTLKLAVSAGDGPVITKVNQGAGDMGAMVKEGLLLPVD
HHHHCCCCEEEEHHHHHHCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCHH
EYIKKYGWDKRQSDSVLARDRWEGAKFGVGKTYGISGLGEIVGLYYNKKILDDAGVALPQ
HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCHH
TFEELLADLDKLKEKGVAPFMMGSAKQHLALHMIGAIDQAHIDAANRAELDDLIYGKGGS
HHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCC
WNTKGNIESAKLVQKWAQGGYFYPGFEGISGDDAVQLFISGQGAFLISGTWYFGDMQNNP
CCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCC
DIGFMAIPAPKGVAKPMSVGGVDLAWAITSLAKDKAKQDLAGEYIDYMVSEKAAESWAAA
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYLPATSLPADAKPKLTPLLTSGIEMWKTLNANDALGHYPDWSSPTMLKTIDDNTPLLLS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE
GKITPEAFVDAMDKDYQAYLKDQK
CCCCHHHHHHHHCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA