| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is yehV [C]
Identifier: 209548802
GI number: 209548802
Start: 1208869
End: 1209408
Strand: Direct
Name: yehV [C]
Synonym: Rleg2_1199
Alternate gene names: 209548802
Gene position: 1208869-1209408 (Clockwise)
Preceding gene: 209548801
Following gene: 209548804
Centisome position: 26.64
GC content: 61.48
Gene sequence:
>540_bases ATGACGTTGGACAAGAGCCCCGATGCCTTTCGCACCATCAGCGAAGTCGCAGACGATCTTGATCTGCCGCAGCATGTGCT GCGCTTCTGGGAAACGCGTTTTCCGCAGATAAAGCCGATGAAGCGCGGCGGCGGCCGTCGCTATTACCGGCCCGAGGATG TGGATCTGCTCAAGGGCATCCGGCATTTGCTCTATGATCACGGCTATACGATCAAGGGCGTGCAGAAGCTTCTGAAAACC AACGGCAACAAGTTCGTGATATCGGTCGGCCACGGCGATCTCGCCACCGTCGAGGCGCTTGCCTCGGGCGTGCAGGAGGC GACCGCCGGGGAACCGCGCGTCGGCATGGCCGACGAAGACCAGATTGTCGGCCGCGCCAAGCCGCCGATTACCCGCCGCT TCTTCAACTTTGTGGCTGGCGAGGACGAGCAGGAAGTCTCGATCGGCAAGTCGAGCGTTGGCAAGGAAGACAGGGCGCTG CTGCAGGAGGCGCTCTACGACCTGCTGGAATGCAAGCGTCTGCTCGATCAGGTGCGCTGA
Upstream 100 bases:
>100_bases GCGTTGTGCGCAACGTCGAGACATGACTTGAATTGTCGGCGCCAAACCGTTGAAATATGATGAGTCGCCGTAAGATCGAG CCGCGAGGTCGCGTAGCAGT
Downstream 100 bases:
>100_bases TCAGAACTCTTTATTTTTACATGTCGGCCAGAATCGCTGCACGCTTCCGGCCGACTTGCCTCAAGCTTCGGTAAGCCGCT TCATCGCCTGTTCGAGTTCG
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTLDKSPDAFRTISEVADDLDLPQHVLRFWETRFPQIKPMKRGGGRRYYRPEDVDLLKGIRHLLYDHGYTIKGVQKLLKT NGNKFVISVGHGDLATVEALASGVQEATAGEPRVGMADEDQIVGRAKPPITRRFFNFVAGEDEQEVSIGKSSVGKEDRAL LQEALYDLLECKRLLDQVR
Sequences:
>Translated_179_residues MTLDKSPDAFRTISEVADDLDLPQHVLRFWETRFPQIKPMKRGGGRRYYRPEDVDLLKGIRHLLYDHGYTIKGVQKLLKT NGNKFVISVGHGDLATVEALASGVQEATAGEPRVGMADEDQIVGRAKPPITRRFFNFVAGEDEQEVSIGKSSVGKEDRAL LQEALYDLLECKRLLDQVR >Mature_178_residues TLDKSPDAFRTISEVADDLDLPQHVLRFWETRFPQIKPMKRGGGRRYYRPEDVDLLKGIRHLLYDHGYTIKGVQKLLKTN GNKFVISVGHGDLATVEALASGVQEATAGEPRVGMADEDQIVGRAKPPITRRFFNFVAGEDEQEVSIGKSSVGKEDRALL QEALYDLLECKRLLDQVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH merR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR000551 [H]
Pfam domain/function: PF00376 MerR [H]
EC number: NA
Molecular weight: Translated: 20153; Mature: 20022
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDKSPDAFRTISEVADDLDLPQHVLRFWETRFPQIKPMKRGGGRRYYRPEDVDLLKGI CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHH RHLLYDHGYTIKGVQKLLKTNGNKFVISVGHGDLATVEALASGVQEATAGEPRVGMADED HHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH QIVGRAKPPITRRFFNFVAGEDEQEVSIGKSSVGKEDRALLQEALYDLLECKRLLDQVR HHCCCCCCHHHHHHHHHHCCCCHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLDKSPDAFRTISEVADDLDLPQHVLRFWETRFPQIKPMKRGGGRRYYRPEDVDLLKGI CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHH RHLLYDHGYTIKGVQKLLKTNGNKFVISVGHGDLATVEALASGVQEATAGEPRVGMADED HHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH QIVGRAKPPITRRFFNFVAGEDEQEVSIGKSSVGKEDRALLQEALYDLLECKRLLDQVR HHCCCCCCHHHHHHHHHHCCCCHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1961742 [H]