| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548700
Identifier: 209548700
GI number: 209548700
Start: 1117032
End: 1117745
Strand: Direct
Name: 209548700
Synonym: Rleg2_1097
Alternate gene names: NA
Gene position: 1117032-1117745 (Clockwise)
Preceding gene: 209548699
Following gene: 209548701
Centisome position: 24.62
GC content: 63.45
Gene sequence:
>714_bases ATGAATGACGTGAAGAACGCTGATCCGAAGCGCAAGGCCGGAGAGCAGCTGCCGCTGGTCTTTTCGCACGATGCCGCAAG CAGCCGTGACGATCTCCTGATCTCGGAGCGCCTCGCTGCCGCGGTGTCGATCGTCGATGCCTGGCCGGCATGGCCGTCGC CGGTCGTCGTGCTCGCCGGCCCGGTCGGCTCGGGAAAATCCCATCTCGCCCGCATCTGGCGGGAATTGAGCGGCGCCGTC GACATCCATCCCGAGCTTGGCTCGGACGCCGCAGTTGCCGCCGCCGCCGGCCCGGTGCTGTTCGAGGATGCCGACCGCCT CGGCTTCGACGACAATGCGCTCTTCCATGTCATCAACAGCGTGCGCGAAAACGGCACCAGCCTGTTGATGACCAGCCGTC TCTGGCCGATCTCCTGGCCGGTTTCGCTGCCCGATCTGCGCTCGCGCCTGAAGGCTGCGACCGTCGTCGAGATCGGCGAG CCCGACGAGGTGCTGTTGTCGCAGGTGATCGTCAAGCTGTTCGCCGACCGCCAGCTTTATATAGATGACAAACTCGTGCT CTATATCGTTGTCAGGATGGAGCGCTCGCTGAATGCAGCCCAGACGATCGTCGAACGACTGGACCGGCTCGCCCTGTCGC GCGGCACGAAGATCACCCGGTCTATGGCTGCCGAAGTATTGAATGAATTGGGAAATTCGGAGCCGGCCGATTGA
Upstream 100 bases:
>100_bases GGCGTCCTTGTTCGTTTCGCGCTTTCACGTTACCTTCAGAGCGATCTTTATTTTGGCGGGTCGTCAGGCGGCCGCGCCCG GAAGACGAAATCAGTTCCCA
Downstream 100 bases:
>100_bases CTGTCACAGTTCCGTCGTGAAACTGATATAATTGCCTTCGGCGATTGAGAATGGGGTGGACCATGGATAGTGCAGTCGCA GAGCATCAGGAACTCACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: DNAA-Related Protein; DNA Replication Initiation ATPase; DNAA-Like Protein; Regulatory Inactivation Of DNAA Hda Protein; ATPase; Chromosomal Replication Initiator Protein DNAA; Chromosomal Replication Initiator; ATPase Involved In DNA Replication Initiation; Chromosomal DNA Replication Initiator-Related Protein; ATPase-Like Protein Involved In DNA Replication Initiation; Chromosomal Replication Initiator DNAa; DNA Replication Initiation Factor; DNA Replication Initiation ATPase Protein; ATPase Involved In DNA Replication Initiation-Like Protein; DNAA-Like Protein Hda
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MNDVKNADPKRKAGEQLPLVFSHDAASSRDDLLISERLAAAVSIVDAWPAWPSPVVVLAGPVGSGKSHLARIWRELSGAV DIHPELGSDAAVAAAAGPVLFEDADRLGFDDNALFHVINSVRENGTSLLMTSRLWPISWPVSLPDLRSRLKAATVVEIGE PDEVLLSQVIVKLFADRQLYIDDKLVLYIVVRMERSLNAAQTIVERLDRLALSRGTKITRSMAAEVLNELGNSEPAD
Sequences:
>Translated_237_residues MNDVKNADPKRKAGEQLPLVFSHDAASSRDDLLISERLAAAVSIVDAWPAWPSPVVVLAGPVGSGKSHLARIWRELSGAV DIHPELGSDAAVAAAAGPVLFEDADRLGFDDNALFHVINSVRENGTSLLMTSRLWPISWPVSLPDLRSRLKAATVVEIGE PDEVLLSQVIVKLFADRQLYIDDKLVLYIVVRMERSLNAAQTIVERLDRLALSRGTKITRSMAAEVLNELGNSEPAD >Mature_237_residues MNDVKNADPKRKAGEQLPLVFSHDAASSRDDLLISERLAAAVSIVDAWPAWPSPVVVLAGPVGSGKSHLARIWRELSGAV DIHPELGSDAAVAAAAGPVLFEDADRLGFDDNALFHVINSVRENGTSLLMTSRLWPISWPVSLPDLRSRLKAATVVEIGE PDEVLLSQVIVKLFADRQLYIDDKLVLYIVVRMERSLNAAQTIVERLDRLALSRGTKITRSMAAEVLNELGNSEPAD
Specific function: Unknown
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25761; Mature: 25761
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVKNADPKRKAGEQLPLVFSHDAASSRDDLLISERLAAAVSIVDAWPAWPSPVVVLAG CCCCCCCCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC PVGSGKSHLARIWRELSGAVDIHPELGSDAAVAAAAGPVLFEDADRLGFDDNALFHVINS CCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCHHCCCHHHCCCCCHHHHHHHHH VRENGTSLLMTSRLWPISWPVSLPDLRSRLKAATVVEIGEPDEVLLSQVIVKLFADRQLY HHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCEEE IDDKLVLYIVVRMERSLNAAQTIVERLDRLALSRGTKITRSMAAEVLNELGNSEPAD ECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNDVKNADPKRKAGEQLPLVFSHDAASSRDDLLISERLAAAVSIVDAWPAWPSPVVVLAG CCCCCCCCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC PVGSGKSHLARIWRELSGAVDIHPELGSDAAVAAAAGPVLFEDADRLGFDDNALFHVINS CCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCHHCCCHHHCCCCCHHHHHHHHH VRENGTSLLMTSRLWPISWPVSLPDLRSRLKAATVVEIGEPDEVLLSQVIVKLFADRQLY HHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCEEE IDDKLVLYIVVRMERSLNAAQTIVERLDRLALSRGTKITRSMAAEVLNELGNSEPAD ECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA