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The map label for this gene is perM [C]

Identifier: 209548699

GI number: 209548699

Start: 1115915

End: 1117039

Strand: Direct

Name: perM [C]

Synonym: Rleg2_1096

Alternate gene names: 209548699

Gene position: 1115915-1117039 (Clockwise)

Preceding gene: 209548696

Following gene: 209548700

Centisome position: 24.59

GC content: 60.71

Gene sequence:

>1125_bases
ATGCCACAGCAAGTCAGCGGCAACAGTCTCAAGCGTCAGATTTTCTTCTGGCTGGCCGTGCTCGTCTTCTTCATCGTCTT
TCTCTACGTCTTCAGCTCGATCCTGCTGCCCTTCATCGCCGGCATGGCGATCGCCTATTTCCTCGATCCGGTCGCCGACC
GGCTGGAGCGCCTGGGTATGAGCCGCATGATGGCGACGGTCGGCATCCTGATCGCCTTCGTCATCACCTTCGCCCTGGCG
CTGATGATCCTCATTCCCGTGCTCGTCAGCCAGTTCAACGACTTCGCCGAGCGGCTGCCGGGTTATATCAGCCAGCTGCA
GCAGTTCATCGACAATTCGAAAAACTCGCTGCTGCCGGACTGGGTCAGGAGCCAGGCCGGCACGCTCAAGGACAATTTCT
CCGGCATCCTCTCCGAAGGCATGGGCTTCTTGACCGGGCTGTTCGCGCAGATCTGGAATTCCGGCAAGGCGATTGTCGAC
GTCATATCGCTGCTCGTCGTCACCCCCGTCGTCGCCTTCTATATCCTGCTCGATTGGGACCGCATGGTGGCCAAGGTCGA
TCAGTGGATCCCGCGCGATTATATCAGTGACGTCCGCCAGATCGCCAGCGAGATCGATCAGGCGATCGCCGGCTTCATCC
GCGGCCAGGGCTCGCTCTGCCTCATCCTCGGCATTTATTATGCCGCCGGCCTGTCTCTCGTCGGTCTGAATTTCGGCCTG
CTGATCGGGCTCTTCGCCGGCATGATCAGTTTCATTCCCTATGTCGGCTCGCTGGTCGGCCTCGTTCTCGCCGTCGGCGT
GGCGATCGTCCAGTTCTGGCCGGATTATCCCTGGATCGGCCTGGTGCTCGCCGTCTTCTTCAGCGGCCAGTTCCTGGAAG
GCAACATCCTGCAGCCGAAGCTCGTCGGCTCCAGCGTCGGGCTGCATCCGGTCTGGCTGATGTTTGCGCTGTTTGCCTTC
GGCGCGCTCTTCGGTTTCGTCGGGCTTCTGGTCGCCGTGCCGGCGGCGGCTGCCGTCGGCGTCCTTGTTCGTTTCGCGCT
TTCACGTTACCTTCAGAGCGATCTTTATTTTGGCGGGTCGTCAGGCGGCCGCGCCCGGAAGACGAAATCAGTTCCCAATG
AATGA

Upstream 100 bases:

>100_bases
GCGACAGGGTTGACCATCTTTGCGCCTGCATCCTATGTGCTGAATGGCCGCGTCGTTCGGATGCGGCGTTTGGCGGCGGA
AAGCGATCAGCGGGGAAGCG

Downstream 100 bases:

>100_bases
CGTGAAGAACGCTGATCCGAAGCGCAAGGCCGGAGAGCAGCTGCCGCTGGTCTTTTCGCACGATGCCGCAAGCAGCCGTG
ACGATCTCCTGATCTCGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MPQQVSGNSLKRQIFFWLAVLVFFIVFLYVFSSILLPFIAGMAIAYFLDPVADRLERLGMSRMMATVGILIAFVITFALA
LMILIPVLVSQFNDFAERLPGYISQLQQFIDNSKNSLLPDWVRSQAGTLKDNFSGILSEGMGFLTGLFAQIWNSGKAIVD
VISLLVVTPVVAFYILLDWDRMVAKVDQWIPRDYISDVRQIASEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGL
LIGLFAGMISFIPYVGSLVGLVLAVGVAIVQFWPDYPWIGLVLAVFFSGQFLEGNILQPKLVGSSVGLHPVWLMFALFAF
GALFGFVGLLVAVPAAAAVGVLVRFALSRYLQSDLYFGGSSGGRARKTKSVPNE

Sequences:

>Translated_374_residues
MPQQVSGNSLKRQIFFWLAVLVFFIVFLYVFSSILLPFIAGMAIAYFLDPVADRLERLGMSRMMATVGILIAFVITFALA
LMILIPVLVSQFNDFAERLPGYISQLQQFIDNSKNSLLPDWVRSQAGTLKDNFSGILSEGMGFLTGLFAQIWNSGKAIVD
VISLLVVTPVVAFYILLDWDRMVAKVDQWIPRDYISDVRQIASEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGL
LIGLFAGMISFIPYVGSLVGLVLAVGVAIVQFWPDYPWIGLVLAVFFSGQFLEGNILQPKLVGSSVGLHPVWLMFALFAF
GALFGFVGLLVAVPAAAAVGVLVRFALSRYLQSDLYFGGSSGGRARKTKSVPNE
>Mature_373_residues
PQQVSGNSLKRQIFFWLAVLVFFIVFLYVFSSILLPFIAGMAIAYFLDPVADRLERLGMSRMMATVGILIAFVITFALAL
MILIPVLVSQFNDFAERLPGYISQLQQFIDNSKNSLLPDWVRSQAGTLKDNFSGILSEGMGFLTGLFAQIWNSGKAIVDV
ISLLVVTPVVAFYILLDWDRMVAKVDQWIPRDYISDVRQIASEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLL
IGLFAGMISFIPYVGSLVGLVLAVGVAIVQFWPDYPWIGLVLAVFFSGQFLEGNILQPKLVGSSVGLHPVWLMFALFAFG
ALFGFVGLLVAVPAAAAVGVLVRFALSRYLQSDLYFGGSSGGRARKTKSVPNE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=335, Percent_Identity=28.3582089552239, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI87082271, Length=331, Percent_Identity=22.6586102719033, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787885, Length=345, Percent_Identity=24.0579710144928, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40827; Mature: 40696

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQQVSGNSLKRQIFFWLAVLVFFIVFLYVFSSILLPFIAGMAIAYFLDPVADRLERLGM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRMMATVGILIAFVITFALALMILIPVLVSQFNDFAERLPGYISQLQQFIDNSKNSLLPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
WVRSQAGTLKDNFSGILSEGMGFLTGLFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWD
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RMVAKVDQWIPRDYISDVRQIASEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LIGLFAGMISFIPYVGSLVGLVLAVGVAIVQFWPDYPWIGLVLAVFFSGQFLEGNILQPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCH
LVGSSVGLHPVWLMFALFAFGALFGFVGLLVAVPAAAAVGVLVRFALSRYLQSDLYFGGS
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SGGRARKTKSVPNE
CCCCCCCCCCCCCC
>Mature Secondary Structure 
PQQVSGNSLKRQIFFWLAVLVFFIVFLYVFSSILLPFIAGMAIAYFLDPVADRLERLGM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRMMATVGILIAFVITFALALMILIPVLVSQFNDFAERLPGYISQLQQFIDNSKNSLLPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
WVRSQAGTLKDNFSGILSEGMGFLTGLFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWD
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RMVAKVDQWIPRDYISDVRQIASEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LIGLFAGMISFIPYVGSLVGLVLAVGVAIVQFWPDYPWIGLVLAVFFSGQFLEGNILQPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCH
LVGSSVGLHPVWLMFALFAFGALFGFVGLLVAVPAAAAVGVLVRFALSRYLQSDLYFGGS
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SGGRARKTKSVPNE
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]