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The map label for this gene is ropB [H]

Identifier: 209548691

GI number: 209548691

Start: 1107448

End: 1108083

Strand: Direct

Name: ropB [H]

Synonym: Rleg2_1088

Alternate gene names: 209548691

Gene position: 1107448-1108083 (Clockwise)

Preceding gene: 209548685

Following gene: 209548694

Centisome position: 24.4

GC content: 61.95

Gene sequence:

>636_bases
ATGCGTGTACTCATTGCTGGCCTCATGGCCTCCGTTTTTGCAATTGCCGGCATCTCGGCAGCTCAGGCGGCCGATGCCGT
CGACCAGATTCCGGAAGCACCGGTCGCCCAGGAAGCCCCGGTCAAGCCGGCTGGCAGCTGGGAAGGCTTCTACCTCGGCG
GCGCCGGCACCTACAACATGGGTGACTTCGGTTCCGACCGCCACACCTACGGTTTCGGCGGCCAGGTCTTCACCGGCTAC
AACTGGCAGCAGGGCCAGATCGTTTACGGCGTTGAATCCGACCTCGGCTACAGCGGCGACGACGTTTCCTCGGGCGGCGT
TAAGAACAAGTATGGCTGGAACGGCTCCGTCCGTGGCCGCGTCGGCTACGACATGAACCCCTTCCTGCTCTACGGCACGG
CCGGTCTTGCCCTCGGCAACGTCAAGGTTTCCGACGGCACCTCGGACGAAAGCAAGACGAACTACGGCTATACGGTCGGC
GCCGGCGTCGAAGCCTTCGTGACCAACAACATCACGACGCGCCTGGAATATCGCTACACCGACTACCAGAGCAAGGATTA
CGACCTCGACTCCGGCAGCTTCTCGCGCGGTTACGACGAGAACAGCGTCAAGCTCGGTATCGGCGTCAAGTTCTAA

Upstream 100 bases:

>100_bases
CAATTTCAGTCTCGATCCGGAAGGGACATCTGGCAATATCCCGCCAATGCTTCACTGATAGACAGATGATCAGCGGCGCG
GGACTGAAAGGAGACTAAGT

Downstream 100 bases:

>100_bases
TGCATGTCGCCCGGAAGTGTGCAGCGGTTCCGGGAGAACGACATGCATAAAAACAGAGAGCTGAAGCGCGTCGCATGAAT
CAAGTTTAATGCGACGCGCT

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRVLIAGLMASVFAIAGISAAQAADAVDQIPEAPVAQEAPVKPAGSWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGY
NWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNVKVSDGTSDESKTNYGYTVG
AGVEAFVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF

Sequences:

>Translated_211_residues
MRVLIAGLMASVFAIAGISAAQAADAVDQIPEAPVAQEAPVKPAGSWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGY
NWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNVKVSDGTSDESKTNYGYTVG
AGVEAFVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF
>Mature_211_residues
MRVLIAGLMASVFAIAGISAAQAADAVDQIPEAPVAQEAPVKPAGSWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGY
NWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNVKVSDGTSDESKTNYGYTVG
AGVEAFVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 22436; Mature: 22436

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLIAGLMASVFAIAGISAAQAADAVDQIPEAPVAQEAPVKPAGSWEGFYLGGAGTYNM
CEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
GDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGR
CCCCCCCCEECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECEE
VGYDMNPFLLYGTAGLALGNVKVSDGTSDESKTNYGYTVGAGVEAFVTNNITTRLEYRYT
ECCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCEEECCCEEEEEECCEEEEEEEEEC
DYQSKDYDLDSGSFSRGYDENSVKLGIGVKF
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MRVLIAGLMASVFAIAGISAAQAADAVDQIPEAPVAQEAPVKPAGSWEGFYLGGAGTYNM
CEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
GDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGR
CCCCCCCCEECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECEE
VGYDMNPFLLYGTAGLALGNVKVSDGTSDESKTNYGYTVGAGVEAFVTNNITTRLEYRYT
ECCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCEEECCCEEEEEECCEEEEEEEEEC
DYQSKDYDLDSGSFSRGYDENSVKLGIGVKF
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8589412 [H]