| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548614
Identifier: 209548614
GI number: 209548614
Start: 1033172
End: 1033702
Strand: Reverse
Name: 209548614
Synonym: Rleg2_1011
Alternate gene names: NA
Gene position: 1033702-1033172 (Counterclockwise)
Preceding gene: 209548615
Following gene: 209548613
Centisome position: 22.78
GC content: 67.61
Gene sequence:
>531_bases GTGAGTTTCATCGTCGTCTCGCCGCTATCGCGCATCGCAGAGATGGCCGTGCGCCACAAGGCGCGTGAGATGATCAGCCT GATCGCCAAGGAGCAGGCCTTTCACCGGCCGGGCGTGATCGCGGCCGACCGTCATCTGACGCTTGCGATGAACGACATTA CCTTCAAGGGCACCGGCGGCCTGGTGGCGCCCGACGAAACGCATGTGCAGGGAATCATCGACTTTGCCGCGTCGTGGCGG CAGGAGACGCCGCTGCTCATCCATTGCTGGATGGGCGTGTCGCGCTCACCGGCGGCAGCCCTGATCGCCGCGCTCTCGCT CGCACCGGATCAGAGTGAGGAACGGCTTGCCCGCCGACTGCGGGCGGCCTCGCCTTTCGCGACGCCGAATGCCCGGTTGA TCGAGATCGGCGACGCGCTGCTTAACCGCGGCGGCCGGCTAGTTGCGGCAGTGCGGGCGATCGGACGCGGCGCCGATGCC GACGGTAACGCCCCCTTCGTGCTTGCGATCGGCGAGCCCGCCTGCGGTTGA
Upstream 100 bases:
>100_bases GCAGGGAGATGCTGATGATCGAACCGCTGCCGGCAATCGAAGCCCAGAGGCTGTTCTGCGAGCGCTTCGCGGCGATCGAG ACCGCGCGGGAGATGGTCTC
Downstream 100 bases:
>100_bases CGCTGCCGCCATCTGCCCCATCTAGGCCCGACCATGTAGAAAAGGCCAGATCATGCAACAACAAGCAGCCGACGCCCTTC TTGCCACGCAAACGGCGCTC
Product: tyrosine phosphatase protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSFIVVSPLSRIAEMAVRHKAREMISLIAKEQAFHRPGVIAADRHLTLAMNDITFKGTGGLVAPDETHVQGIIDFAASWR QETPLLIHCWMGVSRSPAAALIAALSLAPDQSEERLARRLRAASPFATPNARLIEIGDALLNRGGRLVAAVRAIGRGADA DGNAPFVLAIGEPACG
Sequences:
>Translated_176_residues MSFIVVSPLSRIAEMAVRHKAREMISLIAKEQAFHRPGVIAADRHLTLAMNDITFKGTGGLVAPDETHVQGIIDFAASWR QETPLLIHCWMGVSRSPAAALIAALSLAPDQSEERLARRLRAASPFATPNARLIEIGDALLNRGGRLVAAVRAIGRGADA DGNAPFVLAIGEPACG >Mature_175_residues SFIVVSPLSRIAEMAVRHKAREMISLIAKEQAFHRPGVIAADRHLTLAMNDITFKGTGGLVAPDETHVQGIIDFAASWRQ ETPLLIHCWMGVSRSPAAALIAALSLAPDQSEERLARRLRAASPFATPNARLIEIGDALLNRGGRLVAAVRAIGRGADAD GNAPFVLAIGEPACG
Specific function: Unknown
COG id: COG5350
COG function: function code R; Predicted protein tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18707; Mature: 18576
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIVVSPLSRIAEMAVRHKAREMISLIAKEQAFHRPGVIAADRHLTLAMNDITFKGTGG CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECEEEECCCC LVAPDETHVQGIIDFAASWRQETPLLIHCWMGVSRSPAAALIAALSLAPDQSEERLARRL CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHH RAASPFATPNARLIEIGDALLNRGGRLVAAVRAIGRGADADGNAPFVLAIGEPACG HHCCCCCCCCCEEEEECHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure SFIVVSPLSRIAEMAVRHKAREMISLIAKEQAFHRPGVIAADRHLTLAMNDITFKGTGG CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECEEEECCCC LVAPDETHVQGIIDFAASWRQETPLLIHCWMGVSRSPAAALIAALSLAPDQSEERLARRL CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHH RAASPFATPNARLIEIGDALLNRGGRLVAAVRAIGRGADADGNAPFVLAIGEPACG HHCCCCCCCCCEEEEECHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA