| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548562
Identifier: 209548562
GI number: 209548562
Start: 985151
End: 985510
Strand: Reverse
Name: 209548562
Synonym: Rleg2_0959
Alternate gene names: NA
Gene position: 985510-985151 (Counterclockwise)
Preceding gene: 209548563
Following gene: 209548561
Centisome position: 21.72
GC content: 60.0
Gene sequence:
>360_bases ATGCGCTTCGTCTGCCTCATCTATAATTCCGCCGATATGGATGGCACGCTCAGTCAGGCCGAGGGCGACGAGCTCGTGAG GGCGCATTTCCAGTATGACGAGGAGCTTCAGCGCAAAGGCATCATGATCCATTCCGATGCATTGGAAGGTCCCGACAGCG CCTCGGTCCTGAGAGTGCGCCATGGCATTCTGTCTTCGACCGACGGCCCTTACGTCGAGACCAAGGAACATCTGGCTGGC ATCTACATCATCGAGGCAGCCGATCTCGAAGAGGCGCGCAAGGTCGTCGCGGGCATTCCAAGCGTCCGCGTCGGATCGGT CGAATTGCGTCCGGTGCGGCTCCTCACCCTGCCAGAGTGA
Upstream 100 bases:
>100_bases ACATGGAAGAAGCGAAAGCGATCATTTCCACCTTCCCGATCCTCAAATATGCGTCGATCGAAATCAGGCCCTCCTATTCG ATCAAGGATGGGAGATAGCC
Downstream 100 bases:
>100_bases GGATCGCCCGTTGGAAAGCATGATCGAGGAAATCTACCGATCGCAATCGCGCCGGGTTCTGGCGACGCTGATCCGTCTGC TCGGCGATTTCGACCGTGCC
Product: DGPFAETKE family protein
Products: NA
Alternate protein names: YCII-Like Protein; YCII-Related Protein; DGPF Domain-Containing Protein; DGPF Domain Superfamily; YCII-Related; DGPFAETKE Domain-Containing Protein; DGPF Protein; Dgpf Domain Protein; Dgpfaetke
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MRFVCLIYNSADMDGTLSQAEGDELVRAHFQYDEELQRKGIMIHSDALEGPDSASVLRVRHGILSSTDGPYVETKEHLAG IYIIEAADLEEARKVVAGIPSVRVGSVELRPVRLLTLPE
Sequences:
>Translated_119_residues MRFVCLIYNSADMDGTLSQAEGDELVRAHFQYDEELQRKGIMIHSDALEGPDSASVLRVRHGILSSTDGPYVETKEHLAG IYIIEAADLEEARKVVAGIPSVRVGSVELRPVRLLTLPE >Mature_119_residues MRFVCLIYNSADMDGTLSQAEGDELVRAHFQYDEELQRKGIMIHSDALEGPDSASVLRVRHGILSSTDGPYVETKEHLAG IYIIEAADLEEARKVVAGIPSVRVGSVELRPVRLLTLPE
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13134; Mature: 13134
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFVCLIYNSADMDGTLSQAEGDELVRAHFQYDEELQRKGIMIHSDALEGPDSASVLRVR CEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCEEEECCCCCCCCCHHHHHHH HGILSSTDGPYVETKEHLAGIYIIEAADLEEARKVVAGIPSVRVGSVELRPVRLLTLPE HHHCCCCCCCEEECCCCCCEEEEEEECCHHHHHHHHHCCCCCEECCEEECEEEEEECCC >Mature Secondary Structure MRFVCLIYNSADMDGTLSQAEGDELVRAHFQYDEELQRKGIMIHSDALEGPDSASVLRVR CEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCEEEECCCCCCCCCHHHHHHH HGILSSTDGPYVETKEHLAGIYIIEAADLEEARKVVAGIPSVRVGSVELRPVRLLTLPE HHHCCCCCCCEEECCCCCCEEEEEEECCHHHHHHHHHCCCCCEECCEEECEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA