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The map label for this gene is ydeP [H]

Identifier: 209548551

GI number: 209548551

Start: 971477

End: 971932

Strand: Direct

Name: ydeP [H]

Synonym: Rleg2_0948

Alternate gene names: 209548551

Gene position: 971477-971932 (Clockwise)

Preceding gene: 209548548

Following gene: 209548553

Centisome position: 21.41

GC content: 63.16

Gene sequence:

>456_bases
ATGTCGTTGCCCCGCGCCAAATTCATCAAGAATTTCCCCGGTTGCCCTGTGGAGGCGACGCTGGGTTTTCTCGACGGCAA
ATGGAAGGGGGTGATCCTCTTTCACCTGATGCAGGGCACGCTGCGCTTCAATGAACTGCGCCGCAAGCTGCCGGCCGTCA
CCCAGCGCATGCTGACCAAGCAACTGCGGGAACTGGAACAGTCCGGGCTGGTGTCGCGCACTGTCTATCCCGTCGTGCCG
CCGCATGTCGATTATGCGATGACGCCGCTCGGCATGACGCTGAAGCCGGTCGTCGACGCGCTCGCCGCCTGGGGCGACGA
TTACGTCTTCTGCAGCCCTGAAGGGCGTGAGCTGCGTATGGCTTCAGACGGGATTTATGCGCCGGCGCGGCGCTCCAGCC
GTGCGGAGGCGGCGAAGACGAACAGGCCGAGGAAGGAAAGTGCTGCGCCGACATAA

Upstream 100 bases:

>100_bases
AACTCCTGTGTTCTTTGCACGGAGGCTAGATGCGCACTATGATGAAACAGCGCAAGAATGCACAAATTCTGTACATAGTA
CCAAAAAGGATACTGTAAAA

Downstream 100 bases:

>100_bases
CCGGTGGCGGCGAAACCGTAACCCCAGGCGATGACGAGGCCGCCGAGCCAGGCGCCGATCGCATTGGCGATGTTGAAGGC
GGAATGGTTGGAGGCGGCGG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSLPRAKFIKNFPGCPVEATLGFLDGKWKGVILFHLMQGTLRFNELRRKLPAVTQRMLTKQLRELEQSGLVSRTVYPVVP
PHVDYAMTPLGMTLKPVVDALAAWGDDYVFCSPEGRELRMASDGIYAPARRSSRAEAAKTNRPRKESAAPT

Sequences:

>Translated_151_residues
MSLPRAKFIKNFPGCPVEATLGFLDGKWKGVILFHLMQGTLRFNELRRKLPAVTQRMLTKQLRELEQSGLVSRTVYPVVP
PHVDYAMTPLGMTLKPVVDALAAWGDDYVFCSPEGRELRMASDGIYAPARRSSRAEAAKTNRPRKESAAPT
>Mature_150_residues
SLPRAKFIKNFPGCPVEATLGFLDGKWKGVILFHLMQGTLRFNELRRKLPAVTQRMLTKQLRELEQSGLVSRTVYPVVPP
HVDYAMTPLGMTLKPVVDALAAWGDDYVFCSPEGRELRMASDGIYAPARRSSRAEAAKTNRPRKESAAPT

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=90, Percent_Identity=46.6666666666667, Blast_Score=93, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16859; Mature: 16728

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPRAKFIKNFPGCPVEATLGFLDGKWKGVILFHLMQGTLRFNELRRKLPAVTQRMLTK
CCCCHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLRELEQSGLVSRTVYPVVPPHVDYAMTPLGMTLKPVVDALAAWGDDYVFCSPEGRELRM
HHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEE
ASDGIYAPARRSSRAEAAKTNRPRKESAAPT
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SLPRAKFIKNFPGCPVEATLGFLDGKWKGVILFHLMQGTLRFNELRRKLPAVTQRMLTK
CCCHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLRELEQSGLVSRTVYPVVPPHVDYAMTPLGMTLKPVVDALAAWGDDYVFCSPEGRELRM
HHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEE
ASDGIYAPARRSSRAEAAKTNRPRKESAAPT
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]