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The map label for this gene is nahR [H]

Identifier: 209548505

GI number: 209548505

Start: 918506

End: 919471

Strand: Direct

Name: nahR [H]

Synonym: Rleg2_0902

Alternate gene names: 209548505

Gene position: 918506-919471 (Clockwise)

Preceding gene: 209548500

Following gene: 209548508

Centisome position: 20.24

GC content: 65.84

Gene sequence:

>966_bases
ATGATGATGAATGATGCCACGCTTCGCAAAATCGACCTGAACCTTCTGCTGGCCTTTTCGGTGCTGATGCAGGAGCGCAA
TGTCAGCCGCGCCGCCGACCGCCTGCTGCTCGGCCAGCCGGGCCTGTCGGCCGCGTTGCGACGGCTGCGCGAGACGCTCG
ATGACGAACTTTTCGTGCGGGTCGGTCGGGGCCTGCAGCCGACGCCGCGCGCCCTTTCCATTGCCCCAGCGATCGAGGAT
GCGCTGTCGGGTATTGAACGCGCCATCCGCCCGCAGGCCGACTTCGATCCGGCAAGTTGGCAGGGCGAGTTCCGCATCGG
CATGTGCGACAATCTCGAATCGGCCTTTTTCGGCCCGCTTGTCGCCCGCCTGCTGCAGCTTTCACCCGGCGCCCGGCTGA
TCGGCATCGCTTCCGAAAAGCGCGATGCCGCGCGCCGGCTGGACGAGGGGGTCTTCGATTTCAGCGTTTCCGTGCATGAC
GAACCGGCCTCCTGGCACATCCGCGCGCCGCTGTTCAACCAGGCCTCGATCTGCATTTACGACGAGGCTCAACTCAAGCT
GAAGGCGCCATTAAGCCTTGAGGATTTCGCCAATGTCGCTCATGTCACCGTCTCGTTCGAGGGCAATGCTTCCACAAGCA
TCGACACTGCGCTGAGCCGCACCGGCCATGTCAGGCGTGTGGTGGCCACGGTGCCGCGCTTTTCCGCCCTGCCGACGGCG
CTGCGGGCGATGCCGGCCATATCAGTCGTGCCGGAATCGATCGGCCGCTGCATGGCGCAATTGCACGGGCTGACGATTTG
TGCGCCGCCGCTTTCGCTGCCGGCCGATCCGGTGACGATGCTCTATCGCCGCGTCGACCAGGCCGACGGCCGGGCGCGCT
GGTTCCGCCGGCTGTTCCTCGACGTCGCCGACGAGGCGCTCGTCGCCTCCGGCTGCCGCGTCTCGATATCGAGAGCTGCG
GCGTAG

Upstream 100 bases:

>100_bases
GCCGCCTCGTCGAGGGAGGTTGCGCGGACGGCAGGGAACGAAAAAATGTACAGCTTCTTGACCTATTGCAAATTGATAGT
AGCCATGCCAGGTATTACTC

Downstream 100 bases:

>100_bases
AGCAATTCCAGGAAAAGTGTGAAGCGGTTTTCACAGGCAAAGCGCGAAGCGCTTTTGCCGGGAATTGCGTTATAGCTAAA
GCCTATTACAGCTCGCCTTT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MMMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVRVGRGLQPTPRALSIAPAIED
ALSGIERAIRPQADFDPASWQGEFRIGMCDNLESAFFGPLVARLLQLSPGARLIGIASEKRDAARRLDEGVFDFSVSVHD
EPASWHIRAPLFNQASICIYDEAQLKLKAPLSLEDFANVAHVTVSFEGNASTSIDTALSRTGHVRRVVATVPRFSALPTA
LRAMPAISVVPESIGRCMAQLHGLTICAPPLSLPADPVTMLYRRVDQADGRARWFRRLFLDVADEALVASGCRVSISRAA
A

Sequences:

>Translated_321_residues
MMMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVRVGRGLQPTPRALSIAPAIED
ALSGIERAIRPQADFDPASWQGEFRIGMCDNLESAFFGPLVARLLQLSPGARLIGIASEKRDAARRLDEGVFDFSVSVHD
EPASWHIRAPLFNQASICIYDEAQLKLKAPLSLEDFANVAHVTVSFEGNASTSIDTALSRTGHVRRVVATVPRFSALPTA
LRAMPAISVVPESIGRCMAQLHGLTICAPPLSLPADPVTMLYRRVDQADGRARWFRRLFLDVADEALVASGCRVSISRAA
A
>Mature_321_residues
MMMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVRVGRGLQPTPRALSIAPAIED
ALSGIERAIRPQADFDPASWQGEFRIGMCDNLESAFFGPLVARLLQLSPGARLIGIASEKRDAARRLDEGVFDFSVSVHD
EPASWHIRAPLFNQASICIYDEAQLKLKAPLSLEDFANVAHVTVSFEGNASTSIDTALSRTGHVRRVVATVPRFSALPTA
LRAMPAISVVPESIGRCMAQLHGLTICAPPLSLPADPVTMLYRRVDQADGRARWFRRLFLDVADEALVASGCRVSISRAA
A

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=211, Percent_Identity=32.2274881516588, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1786820, Length=89, Percent_Identity=38.2022471910112, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35065; Mature: 35065

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVR
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHH
VGRGLQPTPRALSIAPAIEDALSGIERAIRPQADFDPASWQGEFRIGMCDNLESAFFGPL
HCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH
VARLLQLSPGARLIGIASEKRDAARRLDEGVFDFSVSVHDEPASWHIRAPLFNQASICIY
HHHHHHCCCCCEEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCEEEEE
DEAQLKLKAPLSLEDFANVAHVTVSFEGNASTSIDTALSRTGHVRRVVATVPRFSALPTA
ECCCEEEECCCCHHHHCCEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHH
LRAMPAISVVPESIGRCMAQLHGLTICAPPLSLPADPVTMLYRRVDQADGRARWFRRLFL
HHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
DVADEALVASGCRVSISRAAA
HHHHHHHHHCCCEEEECCCCC
>Mature Secondary Structure
MMMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVR
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHH
VGRGLQPTPRALSIAPAIEDALSGIERAIRPQADFDPASWQGEFRIGMCDNLESAFFGPL
HCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH
VARLLQLSPGARLIGIASEKRDAARRLDEGVFDFSVSVHDEPASWHIRAPLFNQASICIY
HHHHHHCCCCCEEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCEEEEE
DEAQLKLKAPLSLEDFANVAHVTVSFEGNASTSIDTALSRTGHVRRVVATVPRFSALPTA
ECCCEEEECCCCHHHHCCEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHH
LRAMPAISVVPESIGRCMAQLHGLTICAPPLSLPADPVTMLYRRVDQADGRARWFRRLFL
HHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
DVADEALVASGCRVSISRAAA
HHHHHHHHHCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]