| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548488
Identifier: 209548488
GI number: 209548488
Start: 902570
End: 903493
Strand: Direct
Name: 209548488
Synonym: Rleg2_0885
Alternate gene names: NA
Gene position: 902570-903493 (Clockwise)
Preceding gene: 209548487
Following gene: 209548490
Centisome position: 19.89
GC content: 65.37
Gene sequence:
>924_bases ATGGCCGCGCGCAAGCGAAAATCGCCTAAGGGAAAAAGGGGACGGCAGCAGCCGGGCCTCTTGATGTCGGGTGCAGCGGC CCTCGGCGGCCTCAGCCTGCAGGGCGCCTCGGTGCTCGGCGGCGTCATCGGCCGCAATCCCTCGGTTGCCGGCGGCACGA TCACCTTCGTCGTCATCTTCTCCTTCGTCGCCGCCAATGCGCTCTGGTATCAGCCGGGCCTGCATCCCCACCCGATTTTC CGCACCCGCGATCCGCAGTCTTCCAACGTGCTCGGCGCCCGCCGCCCAGCCGAGGAGCAGCAGGGCGACGTCACCACCTT CCGCATCGAGCGGCCGGAGGATGGCGCGACCACAACCAACGCAACGCCGGCGCCAGCCGCGCCCGGCCAGCAGCCGAGCC AGCTCGTCATGGACATCCAGCAGCAACTGGTGCGCCGCGGCCTCTATAACGGCATACCCGACGGCGTCATCGGCCCACGC ACCAGTGCGGCCATCCTCTTCTTCGAGGAAACCGTCGGCATGGCCCAGACCGGTGATCCGACGCCGGAGGTGCTGGCGGC GCTGAAGACCGATGCATCAGGCCCTTCGACCGTTCCCGCGGAAAAACCGCCCGAGGATGTAAGCTCGAAAGCGGCGGCAG AAGACCCGGTCGCAGCGGCGATCCGCAGCGCCGAAAAGACGGTCAAAACCGCTCCGTCATCCGCAAAGCAGGTTCCCTCA AGCGAAATTACCAATGTCGATCTGGTGCTCAAGATCCAGAAGGGCCTTTCCAACATGGCCTATGCCAATGTCGGCGTCGA CGGTGTCGCCGGCGAGCAGACCCGCGCCGCCATCCGCCATTTCCAGAAGCACTACAACCTGCCCGAAAACGGCGAGCCGA CCCAGGCGGTGCTGAAAAAACTCAAGGAAATCGGCGCGATTTAA
Upstream 100 bases:
>100_bases GTATGCGCCGAAGACGCCGGCCAGGGCGCGACTGTAGAGTTCCCGCCGCGGCTGAAGGGCGCGGTCAATGCAGGTGCAGA ATTGGGGGAGGGGCGTTTCG
Downstream 100 bases:
>100_bases TGCATGTCGCCCGGAAGTGTGCAGCGGTTCCGGGAGAACGACATGCATAAAACAATGAGCTAAAGCGCGTCGCATGAATC AAGTTTGCTGCGGCGCGATT
Product: peptidoglycan-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MAARKRKSPKGKRGRQQPGLLMSGAAALGGLSLQGASVLGGVIGRNPSVAGGTITFVVIFSFVAANALWYQPGLHPHPIF RTRDPQSSNVLGARRPAEEQQGDVTTFRIERPEDGATTTNATPAPAAPGQQPSQLVMDIQQQLVRRGLYNGIPDGVIGPR TSAAILFFEETVGMAQTGDPTPEVLAALKTDASGPSTVPAEKPPEDVSSKAAAEDPVAAAIRSAEKTVKTAPSSAKQVPS SEITNVDLVLKIQKGLSNMAYANVGVDGVAGEQTRAAIRHFQKHYNLPENGEPTQAVLKKLKEIGAI
Sequences:
>Translated_307_residues MAARKRKSPKGKRGRQQPGLLMSGAAALGGLSLQGASVLGGVIGRNPSVAGGTITFVVIFSFVAANALWYQPGLHPHPIF RTRDPQSSNVLGARRPAEEQQGDVTTFRIERPEDGATTTNATPAPAAPGQQPSQLVMDIQQQLVRRGLYNGIPDGVIGPR TSAAILFFEETVGMAQTGDPTPEVLAALKTDASGPSTVPAEKPPEDVSSKAAAEDPVAAAIRSAEKTVKTAPSSAKQVPS SEITNVDLVLKIQKGLSNMAYANVGVDGVAGEQTRAAIRHFQKHYNLPENGEPTQAVLKKLKEIGAI >Mature_306_residues AARKRKSPKGKRGRQQPGLLMSGAAALGGLSLQGASVLGGVIGRNPSVAGGTITFVVIFSFVAANALWYQPGLHPHPIFR TRDPQSSNVLGARRPAEEQQGDVTTFRIERPEDGATTTNATPAPAAPGQQPSQLVMDIQQQLVRRGLYNGIPDGVIGPRT SAAILFFEETVGMAQTGDPTPEVLAALKTDASGPSTVPAEKPPEDVSSKAAAEDPVAAAIRSAEKTVKTAPSSAKQVPSS EITNVDLVLKIQKGLSNMAYANVGVDGVAGEQTRAAIRHFQKHYNLPENGEPTQAVLKKLKEIGAI
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32149; Mature: 32018
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARKRKSPKGKRGRQQPGLLMSGAAALGGLSLQGASVLGGVIGRNPSVAGGTITFVVIF CCCCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH SFVAANALWYQPGLHPHPIFRTRDPQSSNVLGARRPAEEQQGDVTTFRIERPEDGATTTN HHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCC ATPAPAAPGQQPSQLVMDIQQQLVRRGLYNGIPDGVIGPRTSAAILFFEETVGMAQTGDP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCC TPEVLAALKTDASGPSTVPAEKPPEDVSSKAAAEDPVAAAIRSAEKTVKTAPSSAKQVPS CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCC SEITNVDLVLKIQKGLSNMAYANVGVDGVAGEQTRAAIRHFQKHYNLPENGEPTQAVLKK CCCCCCCEEEEEHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LKEIGAI HHHHCCC >Mature Secondary Structure AARKRKSPKGKRGRQQPGLLMSGAAALGGLSLQGASVLGGVIGRNPSVAGGTITFVVIF CCCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH SFVAANALWYQPGLHPHPIFRTRDPQSSNVLGARRPAEEQQGDVTTFRIERPEDGATTTN HHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCC ATPAPAAPGQQPSQLVMDIQQQLVRRGLYNGIPDGVIGPRTSAAILFFEETVGMAQTGDP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCC TPEVLAALKTDASGPSTVPAEKPPEDVSSKAAAEDPVAAAIRSAEKTVKTAPSSAKQVPS CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCC SEITNVDLVLKIQKGLSNMAYANVGVDGVAGEQTRAAIRHFQKHYNLPENGEPTQAVLKK CCCCCCCEEEEEHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LKEIGAI HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA