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The map label for this gene is yqfA [H]

Identifier: 209548470

GI number: 209548470

Start: 886854

End: 887522

Strand: Direct

Name: yqfA [H]

Synonym: Rleg2_0867

Alternate gene names: 209548470

Gene position: 886854-887522 (Clockwise)

Preceding gene: 209548469

Following gene: 209548471

Centisome position: 19.54

GC content: 61.88

Gene sequence:

>669_bases
ATGGCCGAGTTCAACGGCGTTCGCTGGGCTTACGACAGATATGAACTGATCGCCGACGGTATCGTCCATGGCGTCGGTCT
CGTGCTGGCGCTGATCGGCGCCACGGTGCTGATCTTCTACGCCACGCTCTGGAGCTCTTATGGCGCGCTCGCCGCCGCCT
GGATCTATGGCGTCGGGCTGGTGCTGACGCTTGCCATTTCCTTTTCCTACAATGCCTGGCCGGTCTCGCGCACCAAATGG
TATCTGCGCCGCTTCGATCATTCGGCGATCTTCCTGTTGATCGCCGCCACCTACACGCCCTTCCTCGAACGCGGCGCCGA
CGACCCGCTACTCCTGTTCATGCTGGTGGCGATCTGGCTGTTTGCCGCTGCCGGGATTATTCTGAAATGCGTCTTTCCCG
GCCGTTACGACCGTCTCGCCATCCTGCTCTATCTCGCCATGGGCTGGAGCGGCGTGCTGGTGGCCGAACCGGTCGCCTCG
CGCATTCCCTCCGCCTCGATGCTGCTCATCGTCATCGGCGGGGTCATTTATTCACTCGGCGTCATCTTCCATGTCTGGGA
GAAGCTGCGCTTCCAGAACGCCATCTGGCACGGTTTCGTCGTCACCGCCGCGGCCGTGCATTATTCGGCCGTCTTCACCT
GTTTCAGCCTGTCGGTGCCGGGCGTCTGA

Upstream 100 bases:

>100_bases
GCCTGTCACGAAGATTTACCGCCGGTGCGCTTTGCCGCAGTTGCGTGCCCTACCGTTCGATGCGACGATTGCAATCGGGG
TATGAAACGGATTGGCGTGC

Downstream 100 bases:

>100_bases
TAAATATCGCGCCCGACGTTTCTGCGGATGGATCCACCGTTTACATCTTTTGGGGCAGGGCGTATGCCGCCTCACGCAGA
CAATACGAACAGGCAATCAT

Product: Hly-III family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAEFNGVRWAYDRYELIADGIVHGVGLVLALIGATVLIFYATLWSSYGALAAAWIYGVGLVLTLAISFSYNAWPVSRTKW
YLRRFDHSAIFLLIAATYTPFLERGADDPLLLFMLVAIWLFAAAGIILKCVFPGRYDRLAILLYLAMGWSGVLVAEPVAS
RIPSASMLLIVIGGVIYSLGVIFHVWEKLRFQNAIWHGFVVTAAAVHYSAVFTCFSLSVPGV

Sequences:

>Translated_222_residues
MAEFNGVRWAYDRYELIADGIVHGVGLVLALIGATVLIFYATLWSSYGALAAAWIYGVGLVLTLAISFSYNAWPVSRTKW
YLRRFDHSAIFLLIAATYTPFLERGADDPLLLFMLVAIWLFAAAGIILKCVFPGRYDRLAILLYLAMGWSGVLVAEPVAS
RIPSASMLLIVIGGVIYSLGVIFHVWEKLRFQNAIWHGFVVTAAAVHYSAVFTCFSLSVPGV
>Mature_221_residues
AEFNGVRWAYDRYELIADGIVHGVGLVLALIGATVLIFYATLWSSYGALAAAWIYGVGLVLTLAISFSYNAWPVSRTKWY
LRRFDHSAIFLLIAATYTPFLERGADDPLLLFMLVAIWLFAAAGIILKCVFPGRYDRLAILLYLAMGWSGVLVAEPVASR
IPSASMLLIVIGGVIYSLGVIFHVWEKLRFQNAIWHGFVVTAAAVHYSAVFTCFSLSVPGV

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI52630445, Length=215, Percent_Identity=35.3488372093023, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI154759275, Length=211, Percent_Identity=30.8056872037915, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI154759277, Length=235, Percent_Identity=28.5106382978723, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1789266, Length=213, Percent_Identity=38.9671361502347, Blast_Score=157, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24640324, Length=230, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24461; Mature: 24330

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFNGVRWAYDRYELIADGIVHGVGLVLALIGATVLIFYATLWSSYGALAAAWIYGVGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTLAISFSYNAWPVSRTKWYLRRFDHSAIFLLIAATYTPFLERGADDPLLLFMLVAIWL
HHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FAAAGIILKCVFPGRYDRLAILLYLAMGWSGVLVAEPVASRIPSASMLLIVIGGVIYSLG
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHCCCHHHHHHHHHHHHHHHH
VIFHVWEKLRFQNAIWHGFVVTAAAVHYSAVFTCFSLSVPGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AEFNGVRWAYDRYELIADGIVHGVGLVLALIGATVLIFYATLWSSYGALAAAWIYGVGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTLAISFSYNAWPVSRTKWYLRRFDHSAIFLLIAATYTPFLERGADDPLLLFMLVAIWL
HHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FAAAGIILKCVFPGRYDRLAILLYLAMGWSGVLVAEPVASRIPSASMLLIVIGGVIYSLG
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHCCCHHHHHHHHHHHHHHHH
VIFHVWEKLRFQNAIWHGFVVTAAAVHYSAVFTCFSLSVPGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]