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The map label for this gene is uspF [H]

Identifier: 209548469

GI number: 209548469

Start: 886307

End: 886726

Strand: Direct

Name: uspF [H]

Synonym: Rleg2_0866

Alternate gene names: 209548469

Gene position: 886307-886726 (Clockwise)

Preceding gene: 209548465

Following gene: 209548470

Centisome position: 19.53

GC content: 60.48

Gene sequence:

>420_bases
ATGTACAGGAAGATCATCGTAGCGATCGCATTCGGGGGCATCGAAAAGGGAGAGAAAATCCTCCGCAAGGCCGCGTCTCT
GCTCGATGACGGCGGCGAGATCGTCGCGCTCAACGTCATCGAGGATGTGCCGACCTATGTCGCGATCGAACTGCCGGCCA
ATATGGTCGAGGACGCCATGCAGGACAGCCGTGACAAGCTGAAGGCACTGCTGACAGAAACCGGCATTGCGGCAACCGTC
GAGATCCGCAACGGCCCGCCCGCCAAGGCGATCATCTCGACCGCCGAAAGCTACGGCGCCGACCTGATCATCGTCGCCTC
GCATGTTCCGGATTTTTCCAACTACTTCATCGGCGCCACCGCCGACCGGGTCGTGCGCCATGCCAAATGCTCGGTGCTCG
TCGACCGGCAAAAGGTTTGA

Upstream 100 bases:

>100_bases
TGAACGGCTGTTGACGATGACTGTGCGCCCACTTGATCGCCGTCAATGCGGCCATATCTTCTTTAGAGGATGCTTATACA
TCTCAGTCATGGAGGGAGCC

Downstream 100 bases:

>100_bases
TTTGTGCGGCCGTCTCGCCGCCAGACAGCCTGTCACGAAGATTTACCGCCGGTGCGCTTTGCCGCAGTTGCGTGCCCTAC
CGTTCGATGCGACGATTGCA

Product: UspA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MYRKIIVAIAFGGIEKGEKILRKAASLLDDGGEIVALNVIEDVPTYVAIELPANMVEDAMQDSRDKLKALLTETGIAATV
EIRNGPPAKAIISTAESYGADLIIVASHVPDFSNYFIGATADRVVRHAKCSVLVDRQKV

Sequences:

>Translated_139_residues
MYRKIIVAIAFGGIEKGEKILRKAASLLDDGGEIVALNVIEDVPTYVAIELPANMVEDAMQDSRDKLKALLTETGIAATV
EIRNGPPAKAIISTAESYGADLIIVASHVPDFSNYFIGATADRVVRHAKCSVLVDRQKV
>Mature_139_residues
MYRKIIVAIAFGGIEKGEKILRKAASLLDDGGEIVALNVIEDVPTYVAIELPANMVEDAMQDSRDKLKALLTETGIAATV
EIRNGPPAKAIISTAESYGADLIIVASHVPDFSNYFIGATADRVVRHAKCSVLVDRQKV

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI87081893, Length=146, Percent_Identity=31.5068493150685, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 14938; Mature: 14938

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRKIIVAIAFGGIEKGEKILRKAASLLDDGGEIVALNVIEDVPTYVAIELPANMVEDAM
CCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCHHHHHHHH
QDSRDKLKALLTETGIAATVEIRNGPPAKAIISTAESYGADLIIVASHVPDFSNYFIGAT
HHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCC
ADRVVRHAKCSVLVDRQKV
HHHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MYRKIIVAIAFGGIEKGEKILRKAASLLDDGGEIVALNVIEDVPTYVAIELPANMVEDAM
CCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCHHHHHHHH
QDSRDKLKALLTETGIAATVEIRNGPPAKAIISTAESYGADLIIVASHVPDFSNYFIGAT
HHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCC
ADRVVRHAKCSVLVDRQKV
HHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]