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The map label for this gene is gdh [H]

Identifier: 209548459

GI number: 209548459

Start: 872290

End: 874629

Strand: Reverse

Name: gdh [H]

Synonym: Rleg2_0856

Alternate gene names: 209548459

Gene position: 874629-872290 (Counterclockwise)

Preceding gene: 209548460

Following gene: 209548455

Centisome position: 19.27

GC content: 65.47

Gene sequence:

>2340_bases
ATGGCGATCGTCGTCACCTCCATCCTCTTCATCATCATCGGGCTGACGCTCGGCGGCGGCGGGCTCTGGCTCGTGACGCT
CGGCGGCAGTGTCTTCTACCTGTTCGCCGGGCTGATGTTCCTGATCACCGCCGGGCTGCTTCTGATGCGCAAGGCGGTGG
CGCTCTGGGTCTATGCGGTGCTCGTCGTCGCAGCACTCGCCTGGGCGATTTGGGAGGTGGGTTTCGATTGGTGGCAGCTC
GGCCCGCGCGGCGGCATGATCATCCTGCTCGGGCTCTGGCTGCTGACGCCGTGGATCCGCCGGCCGCTCGGCTTTCGCAG
CCCGACGGGCATCACCTACGGCGCCAATCCCTGGCCGCTCGCCGTGCCCGTCATTCTCGCCGTCGTCGTCGCGCTCTATT
CGATGACGACGGACCCGCACGATCTTGCCGGCGAACTGCCGAAGGATGCGGTCGCCGCCAACCCCGCCTTCGGCGGCAAC
GTGCCGGATGGCGAATGGCACCAATATGGCCGCACGCCGTTCGGCCAGCGTTATTCGCCGCTCGACCAGATCACGACCGC
GAATGTCTCCACCCTCAAGGAGGCGTGGCGATACGAGACCGGCGACGTCAAGCGGCCGGATGATGTCGGCGAGACGACCT
ATCAGGTGACGCCGCTCAAGGTGAAGGACACGCTCTACCTCTGCACGCCGCACAACTGGGCGATCGCGCTCGACGCCAAG
ACCGGCAAGGAGAAATGGAAATATGACGCCAACTCCGGCATGAACCCGGACCGGCAGCACCAGACCTGCCGCGGCGTCAC
CTATTATGCCGATCCGGATGTCGCCGCCGGCCAGCCCTGTGCCGAGCGCGTCTACCTGCCGACCTCCGATGCGCGGCTGA
TCGCGCTCGATGCGGCGGACGGCAAGGTCTGCACCGGTTTTGCCGATCAGGGCGTGCTGCATCTGGAAACCGGAATGCGC
TACAATCCGGCCGGCTATTATTACTCCACCTCGCCGCCGGTCGCGGTGGCGGGCAAGATCATCGTCGGCGGGGCGGTGAA
CGACAATTATTCCACCGAGGAGCAATCCGGCGTCATCCGCGCCTTCGACATCAAGACCGGCGCGCTGATCTGGAACTGGG
ATTCCGGCAATCCCGACGTGACGACGCCGCTTGCCGCAGGCCAGACCTATACGACCAACTCGCCGAACAGCTGGTCGGTC
TTCAGCGTCGACGAGGCGCTCGGCATGGTCTACATTCCGCTCGGCAACCAGGTGCCCGACCAGCTCGGCATCAACCGCAG
CGACAATGTCGAGAAATTCTCCTCCTCGATCGTCGCGCTGGATATCGCCAGCGGCCAGCTGCGCTGGGTGCGCCAGACTG
TCCATCACGATCTCTGGGACATGGACGTGCCGGCCCAGCCGGCGCTGATCGATCTGACCAAGCCTGATGGCACCGTGGTT
CCCGCCCTCGTCGGCCCGACCAAGCAGGGCGATCTCTATGTGCTCGATCGGCGGAGCGGCGAGCCGGTCATCCCGGTCAA
GGAAATCGCAGCGCCCGGCGGCGCGGTCTCCGGCGATCATACCGCACCGACGCAGCCGATCTCCGACCTCACCTTCTCGC
CGGAGCCGCTGAAGGAAAAGGACATGTGGGGCGTATCGCTGTTCGACCAGCTCGCCTGCCGCATCGATTTCCACCGCTAC
CGCTACGAGGGCCGCTACACGCCGCCGTCGCTTGTCGGCACGATCGTCTATCCCGGCAATTTCGGCACCTTCAACTGGGG
CTCGGTGGCAGTGGACCCGGAGCGGCAGATCATGTTCGGCATGCCGACCTATCTCGCCTTCACCTCGCGCCTGGTGCCGG
CCGCCGACATTCCGCCGCGCGGCCAGGACGAAAAGGGCAGCGAACAGGGGCTCAACCGCAATGACGGCGCGCCTTACGGC
GTCTTCATGGGGCCCTTCCTCGGGCTCTTGAAAATCCCCTGCCAGGCGCCGCCATGGGGCTATGTCGCCGGCGTCGATCT
GCGCACCGGCAAGATCGCCTATATGCACAAGAACGGCACCGTGCACGACATGACGCCGCTGCCCCTGCCCTTCAAGGTCG
GCGTGCCCGGCATCGGCGGACCGATGCTGACCAAGGGCGGCGTCGCCTTCCTCGGCGCCGCAGTCGACAACTATCTCAGA
GCCTATGACGTGACGAACGGGCAAGAACTCTGGCAAGCCCGGCTTCCGGCCGGCGGCCAGGCGACGCCGATGACCTATGC
GACAAGCGACAACAAACAATACGTCGTCATGGTCGCCGGCGGCCACGGCTCGGTCGGGACGAAGCCCGGTGATTATGTGA
TTGCTTATACGCTGCCGTGA

Upstream 100 bases:

>100_bases
AATGCGGCCGTTGAAAGGCATCTCCTTCGCGCTATCTGGCTGATCGGCGGGGCTTTTCCGCCGCATCTTCACCCGGCTAA
ATCAAGCGGGAGACAGCCAT

Downstream 100 bases:

>100_bases
TGGAGGGCTGCCCTCTCAACGCAGTGCTTTTGGCCGTGGGTCCTCGGGTCAAGCCCGAGGACGACGGAGGGTTGGGGAGC
CTATGTGGCAAGGACCGCAA

Product: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Products: NA

Alternate protein names: Glucose dehydrogenase [pyrroloquinoline-quinone] [H]

Number of amino acids: Translated: 779; Mature: 778

Protein sequence:

>779_residues
MAIVVTSILFIIIGLTLGGGGLWLVTLGGSVFYLFAGLMFLITAGLLLMRKAVALWVYAVLVVAALAWAIWEVGFDWWQL
GPRGGMIILLGLWLLTPWIRRPLGFRSPTGITYGANPWPLAVPVILAVVVALYSMTTDPHDLAGELPKDAVAANPAFGGN
VPDGEWHQYGRTPFGQRYSPLDQITTANVSTLKEAWRYETGDVKRPDDVGETTYQVTPLKVKDTLYLCTPHNWAIALDAK
TGKEKWKYDANSGMNPDRQHQTCRGVTYYADPDVAAGQPCAERVYLPTSDARLIALDAADGKVCTGFADQGVLHLETGMR
YNPAGYYYSTSPPVAVAGKIIVGGAVNDNYSTEEQSGVIRAFDIKTGALIWNWDSGNPDVTTPLAAGQTYTTNSPNSWSV
FSVDEALGMVYIPLGNQVPDQLGINRSDNVEKFSSSIVALDIASGQLRWVRQTVHHDLWDMDVPAQPALIDLTKPDGTVV
PALVGPTKQGDLYVLDRRSGEPVIPVKEIAAPGGAVSGDHTAPTQPISDLTFSPEPLKEKDMWGVSLFDQLACRIDFHRY
RYEGRYTPPSLVGTIVYPGNFGTFNWGSVAVDPERQIMFGMPTYLAFTSRLVPAADIPPRGQDEKGSEQGLNRNDGAPYG
VFMGPFLGLLKIPCQAPPWGYVAGVDLRTGKIAYMHKNGTVHDMTPLPLPFKVGVPGIGGPMLTKGGVAFLGAAVDNYLR
AYDVTNGQELWQARLPAGGQATPMTYATSDNKQYVVMVAGGHGSVGTKPGDYVIAYTLP

Sequences:

>Translated_779_residues
MAIVVTSILFIIIGLTLGGGGLWLVTLGGSVFYLFAGLMFLITAGLLLMRKAVALWVYAVLVVAALAWAIWEVGFDWWQL
GPRGGMIILLGLWLLTPWIRRPLGFRSPTGITYGANPWPLAVPVILAVVVALYSMTTDPHDLAGELPKDAVAANPAFGGN
VPDGEWHQYGRTPFGQRYSPLDQITTANVSTLKEAWRYETGDVKRPDDVGETTYQVTPLKVKDTLYLCTPHNWAIALDAK
TGKEKWKYDANSGMNPDRQHQTCRGVTYYADPDVAAGQPCAERVYLPTSDARLIALDAADGKVCTGFADQGVLHLETGMR
YNPAGYYYSTSPPVAVAGKIIVGGAVNDNYSTEEQSGVIRAFDIKTGALIWNWDSGNPDVTTPLAAGQTYTTNSPNSWSV
FSVDEALGMVYIPLGNQVPDQLGINRSDNVEKFSSSIVALDIASGQLRWVRQTVHHDLWDMDVPAQPALIDLTKPDGTVV
PALVGPTKQGDLYVLDRRSGEPVIPVKEIAAPGGAVSGDHTAPTQPISDLTFSPEPLKEKDMWGVSLFDQLACRIDFHRY
RYEGRYTPPSLVGTIVYPGNFGTFNWGSVAVDPERQIMFGMPTYLAFTSRLVPAADIPPRGQDEKGSEQGLNRNDGAPYG
VFMGPFLGLLKIPCQAPPWGYVAGVDLRTGKIAYMHKNGTVHDMTPLPLPFKVGVPGIGGPMLTKGGVAFLGAAVDNYLR
AYDVTNGQELWQARLPAGGQATPMTYATSDNKQYVVMVAGGHGSVGTKPGDYVIAYTLP
>Mature_778_residues
AIVVTSILFIIIGLTLGGGGLWLVTLGGSVFYLFAGLMFLITAGLLLMRKAVALWVYAVLVVAALAWAIWEVGFDWWQLG
PRGGMIILLGLWLLTPWIRRPLGFRSPTGITYGANPWPLAVPVILAVVVALYSMTTDPHDLAGELPKDAVAANPAFGGNV
PDGEWHQYGRTPFGQRYSPLDQITTANVSTLKEAWRYETGDVKRPDDVGETTYQVTPLKVKDTLYLCTPHNWAIALDAKT
GKEKWKYDANSGMNPDRQHQTCRGVTYYADPDVAAGQPCAERVYLPTSDARLIALDAADGKVCTGFADQGVLHLETGMRY
NPAGYYYSTSPPVAVAGKIIVGGAVNDNYSTEEQSGVIRAFDIKTGALIWNWDSGNPDVTTPLAAGQTYTTNSPNSWSVF
SVDEALGMVYIPLGNQVPDQLGINRSDNVEKFSSSIVALDIASGQLRWVRQTVHHDLWDMDVPAQPALIDLTKPDGTVVP
ALVGPTKQGDLYVLDRRSGEPVIPVKEIAAPGGAVSGDHTAPTQPISDLTFSPEPLKEKDMWGVSLFDQLACRIDFHRYR
YEGRYTPPSLVGTIVYPGNFGTFNWGSVAVDPERQIMFGMPTYLAFTSRLVPAADIPPRGQDEKGSEQGLNRNDGAPYGV
FMGPFLGLLKIPCQAPPWGYVAGVDLRTGKIAYMHKNGTVHDMTPLPLPFKVGVPGIGGPMLTKGGVAFLGAAVDNYLRA
YDVTNGQELWQARLPAGGQATPMTYATSDNKQYVVMVAGGHGSVGTKPGDYVIAYTLP

Specific function: Gdh Is Probably Involved In Energy Conservation Rather Than In Sugar Metabolism. [C]

COG id: COG4993

COG function: function code G; Glucose dehydrogenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1786316, Length=794, Percent_Identity=46.8513853904282, Blast_Score=690, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017511
- InterPro:   IPR019556
- InterPro:   IPR019551
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047
- InterPro:   IPR001479 [H]

Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]

EC number: =1.1.5.2 [H]

Molecular weight: Translated: 84232; Mature: 84101

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVVTSILFIIIGLTLGGGGLWLVTLGGSVFYLFAGLMFLITAGLLLMRKAVALWVYAV
CEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVAALAWAIWEVGFDWWQLGPRGGMIILLGLWLLTPWIRRPLGFRSPTGITYGANPWPL
HHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
AVPVILAVVVALYSMTTDPHDLAGELPKDAVAANPAFGGNVPDGEWHQYGRTPFGQRYSP
HHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
LDQITTANVSTLKEAWRYETGDVKRPDDVGETTYQVTPLKVKDTLYLCTPHNWAIALDAK
HHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECEEEEECCCCEEEEEECC
TGKEKWKYDANSGMNPDRQHQTCRGVTYYADPDVAAGQPCAERVYLPTSDARLIALDAAD
CCCCCEEECCCCCCCCCHHHHHHCCEEEECCCCCCCCCCHHHEEECCCCCCEEEEEECCC
GKVCTGFADQGVLHLETGMRYNPAGYYYSTSPPVAVAGKIIVGGAVNDNYSTEEQSGVIR
CCEEECCCCCCEEEEECCCEECCCCEEECCCCCCEEECEEEECCCCCCCCCCHHHCCCEE
AFDIKTGALIWNWDSGNPDVTTPLAAGQTYTTNSPNSWSVFSVDEALGMVYIPLGNQVPD
EEEECCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCEEEEECCCCCCH
QLGINRSDNVEKFSSSIVALDIASGQLRWVRQTVHHDLWDMDVPAQPALIDLTKPDGTVV
HHCCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE
PALVGPTKQGDLYVLDRRSGEPVIPVKEIAAPGGAVSGDHTAPTQPISDLTFSPEPLKEK
EEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DMWGVSLFDQLACRIDFHRYRYEGRYTPPSLVGTIVYPGNFGTFNWGSVAVDPERQIMFG
CCCCHHHHHHHHHHEEEEHEEECCCCCCHHHEEEEEECCCCCCCCCCCEEECCCCEEEEC
MPTYLAFTSRLVPAADIPPRGQDEKGSEQGLNRNDGAPYGVFMGPFLGLLKIPCQAPPWG
CCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
YVAGVDLRTGKIAYMHKNGTVHDMTPLPLPFKVGVPGIGGPMLTKGGVAFLGAAVDNYLR
EEEEEEECCCEEEEEECCCCEECCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
AYDVTNGQELWQARLPAGGQATPMTYATSDNKQYVVMVAGGHGSVGTKPGDYVIAYTLP
HCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
AIVVTSILFIIIGLTLGGGGLWLVTLGGSVFYLFAGLMFLITAGLLLMRKAVALWVYAV
EEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVAALAWAIWEVGFDWWQLGPRGGMIILLGLWLLTPWIRRPLGFRSPTGITYGANPWPL
HHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
AVPVILAVVVALYSMTTDPHDLAGELPKDAVAANPAFGGNVPDGEWHQYGRTPFGQRYSP
HHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
LDQITTANVSTLKEAWRYETGDVKRPDDVGETTYQVTPLKVKDTLYLCTPHNWAIALDAK
HHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECEEEEECCCCEEEEEECC
TGKEKWKYDANSGMNPDRQHQTCRGVTYYADPDVAAGQPCAERVYLPTSDARLIALDAAD
CCCCCEEECCCCCCCCCHHHHHHCCEEEECCCCCCCCCCHHHEEECCCCCCEEEEEECCC
GKVCTGFADQGVLHLETGMRYNPAGYYYSTSPPVAVAGKIIVGGAVNDNYSTEEQSGVIR
CCEEECCCCCCEEEEECCCEECCCCEEECCCCCCEEECEEEECCCCCCCCCCHHHCCCEE
AFDIKTGALIWNWDSGNPDVTTPLAAGQTYTTNSPNSWSVFSVDEALGMVYIPLGNQVPD
EEEECCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCEEEEECCCCCCH
QLGINRSDNVEKFSSSIVALDIASGQLRWVRQTVHHDLWDMDVPAQPALIDLTKPDGTVV
HHCCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE
PALVGPTKQGDLYVLDRRSGEPVIPVKEIAAPGGAVSGDHTAPTQPISDLTFSPEPLKEK
EEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DMWGVSLFDQLACRIDFHRYRYEGRYTPPSLVGTIVYPGNFGTFNWGSVAVDPERQIMFG
CCCCHHHHHHHHHHEEEEHEEECCCCCCHHHEEEEEECCCCCCCCCCCEEECCCCEEEEC
MPTYLAFTSRLVPAADIPPRGQDEKGSEQGLNRNDGAPYGVFMGPFLGLLKIPCQAPPWG
CCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
YVAGVDLRTGKIAYMHKNGTVHDMTPLPLPFKVGVPGIGGPMLTKGGVAFLGAAVDNYLR
EEEEEEECCCEEEEEECCCCEECCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
AYDVTNGQELWQARLPAGGQATPMTYATSDNKQYVVMVAGGHGSVGTKPGDYVIAYTLP
HCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1833618 [H]