| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is guaD [H]
Identifier: 209548305
GI number: 209548305
Start: 724975
End: 725448
Strand: Reverse
Name: guaD [H]
Synonym: Rleg2_0700
Alternate gene names: 209548305
Gene position: 725448-724975 (Counterclockwise)
Preceding gene: 209548308
Following gene: 209548304
Centisome position: 15.99
GC content: 61.18
Gene sequence:
>474_bases ATGGAAAACCACGAGCCGTTTTTACGCGAGGCGATTGCGCTCTCGAAATCCGCGATGGACCAAGGCGACGAACCATTCGG CTCGGTGCTGGTGAAGGATGGCGAGGTCATCCTGCGCGCCGAAAACAGCGTCTTCACCGGCCACGATATGACGAACCACG CCGAAATGAACCTGATTAAATCTGCAGCGAAGCACTACGACACCGGTTTTCTCGCCGACTGCACGCTCTATACCAGCACG GAGCCGTGCGCGATGTGCTCCGGGGCGATTTACTGGTCAGGCATCGGGCGCATGGTGTTTGCGTGCTCCGAAGCCCGGCT TGGCGAGATCGCCGGGATCGGGCTGAACGTGCCGAGCCGGGCGGTCTTGCAAACCGGCGCGCGCACCGTCACTGTGGTTG GCCCGACGAACCTCGAAGACGAAGCCGCGGAAGTGCATCAGGCATTCTGGCCGAAGCATCTCGGCAAGGCTTAG
Upstream 100 bases:
>100_bases TTGCCGCGATCCGGATCGCCGATCCTCAATCGGATTTGCAGCCCTTGGAAATCCCTCCGATTCAAGACAAACTCTTGCTC TAGCTTTTGGGGGGACTGTG
Downstream 100 bases:
>100_bases CCTCAGGCGGGAGCTTGGCGAAAGCGCGCCTCCGTCATTCCAGGCCTCGAGCCTGGGATCCATGCCCACTGCGGTCGTGC GCGTCAGCCCCCCTCTGCCC
Product: zinc-binding CMP/dCMP deaminase
Products: NA
Alternate protein names: GDEase; Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MENHEPFLREAIALSKSAMDQGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLIKSAAKHYDTGFLADCTLYTST EPCAMCSGAIYWSGIGRMVFACSEARLGEIAGIGLNVPSRAVLQTGARTVTVVGPTNLEDEAAEVHQAFWPKHLGKA
Sequences:
>Translated_157_residues MENHEPFLREAIALSKSAMDQGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLIKSAAKHYDTGFLADCTLYTST EPCAMCSGAIYWSGIGRMVFACSEARLGEIAGIGLNVPSRAVLQTGARTVTVVGPTNLEDEAAEVHQAFWPKHLGKA >Mature_157_residues MENHEPFLREAIALSKSAMDQGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLIKSAAKHYDTGFLADCTLYTST EPCAMCSGAIYWSGIGRMVFACSEARLGEIAGIGLNVPSRAVLQTGARTVTVVGPTNLEDEAAEVHQAFWPKHLGKA
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0590
COG function: function code FJ; Cytosine/adenosine deaminases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]
Homologues:
Organism=Escherichia coli, GI145693172, Length=106, Percent_Identity=39.622641509434, Blast_Score=82, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17541138, Length=111, Percent_Identity=39.6396396396396, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17554608, Length=106, Percent_Identity=39.622641509434, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17555996, Length=110, Percent_Identity=35.4545454545455, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016192 - InterPro: IPR002125 - InterPro: IPR016193 [H]
Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 16899; Mature: 16899
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00903 CYT_DCMP_DEAMINASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENHEPFLREAIALSKSAMDQGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLIK CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCEEECCCCCCHHHHHHHH SAAKHYDTGFLADCTLYTSTEPCAMCSGAIYWSGIGRMVFACSEARLGEIAGIGLNVPSR HHHHHCCCCCEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCH AVLQTGARTVTVVGPTNLEDEAAEVHQAFWPKHLGKA HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MENHEPFLREAIALSKSAMDQGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLIK CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCEEECCCCCCHHHHHHHH SAAKHYDTGFLADCTLYTSTEPCAMCSGAIYWSGIGRMVFACSEARLGEIAGIGLNVPSR HHHHHCCCCCEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCH AVLQTGARTVTVVGPTNLEDEAAEVHQAFWPKHLGKA HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11101664 [H]