| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548128
Identifier: 209548128
GI number: 209548128
Start: 535715
End: 537547
Strand: Reverse
Name: 209548128
Synonym: Rleg2_0522
Alternate gene names: NA
Gene position: 537547-535715 (Counterclockwise)
Preceding gene: 209548129
Following gene: 209548127
Centisome position: 11.85
GC content: 63.34
Gene sequence:
>1833_bases ATGCGGCAGAGAATTGCCATCCGTCTTCTTACAAGCGCAGCGCTTGCCGCTGTCCTTTCGCTGGGCGGTGTCGGCGGCGC GAATGCCGAGGATGCGGCCAAGCCGAGCGATGTGGCGAAGACCGATAGCTTCGATGCCGATAGCGTTACCACCTTCTCCG GCGCCTTCCTTGCGGCGCGCACGGCCGATGTCGATCATGACTACGAGACGGCGATCGAACTCTACAAGAAGGCGCTGCAG ATCGAGCCCGGCAATCCCGAGATCCGCCAGCGGCTGATGATCTCGCTGCTGCTCAATGGCGACATCAAGGACGGCGTCAA ATATGCCAACGACCTGAAGGGCGATCCCTCTGTCGAGCGCATTACCACGATCGTGCGCGGCATGGATGCCGTGCGCCGCG ACGATTACAAGACCGCCGAGAGCATTCTCAAATATAACGGGCCGAACGATCTCGACCGGATGATGAACGACCTGCTGCTC GCCTGGGCCCGCGTCGGCGCCGGCCGCGGCAAGGAAGCGCTCGCCATGGTCGAGAAGATGAAGGGGCCGGACTGGGTCCG CATCTTCCAGAATTATAATGCTGGCGCGATCGCCATCGCCACCGGTGACGTAAAATCCGCCCGGAAGCATCTGAACGACG CCGTGCTCGACAAGGAGGGAGGTGCGACCGCACCCGACACCTTCATGCGCGCGGTGATGGCGCTTGCCCGTCTAGAAGCG ACACAAGGCAATAAGCAGAAGGCGCTCGACGCCGTTTCCGTCGGCGACAACCTGCTGCCGAACTACGCGCCGCTGAACGC GTTGCGCGACAGTATCGAAAAAGACGAGAAGCAAGAGCAGCAGGTCAAGACGGCCGAAGAAGGCGCTGCCGGCGTGCTGT TTTCGGTCGGCGGCGCGCTGAACCGCGACGGCGCCGAGGACATCGTCTCGCTTTACCTGCAGACCGCCAATGCGCTCGAC CCGAACAGCGCCGATACGCTGGTGCTGCTCGGCGGCATCGCCGAGAAGCAGAACCAGATGGACCGCGCCATTGCGCTCTA CAAGAAGGTGCCGGAGAATTCGCCGATGCGGCGCATCTCCGAGCTGCAGCTCGGCCTTGCCCTTGCCCAGGGCGGCAAGG TGGACGAGGCGCGCAAGCACCTGCAGGCGCTGATCGCTTCCGACCCGAAGGACATCCGCAGCTATCTCGCCTATGGCAGC GTGCTCTCCGACGCCAAGGACTACGAGGCGATGGCGGCCAATTACGACAAGGCCGTCGACGCGATTGGCCCGATTCCCGG CCGCGCCAACTGGAGCGTCTTCTTCCAGCGCGGCATCGCTTATGAGCGGCTGAAGAAGTGGGACCAGGCGGAGCCGAATT TCCGCAAGGCCCTCGAACTCAATCCCGACCAGCCGCAGGTGCTGAACTATCTCGGCTATTCCTGGATCGACATGAACCGT AACCTCGATGAAGGTCTCGGCATGATCAAGAAGGCCGTCGACCTTCGCCCCGACGACGGCTACATCATCGATTCGCTCGG CTGGGCCTATTTCCGCCTCAACCGTTTCGACGATGCCGTCGACGAATTGGAGCGGGCAGCCCAGATCAAGGCCGGCGACG CGACGATCAACGACCATCTGGGTGACGCCTACTGGCGCGTCGGCCGCAAGCTCGAGGCCGTCTATCAGTGGAACCGGGCG CTCGCCTCCGAGCCGGAAGCCGCCGAGATCCCGAAGATCAAGGACAAGGTCGCCAATGGCCTGCCCGCCGTCAGCGACGA TGCCAAGGCGGCCGACAAGAAGCAGCCGGATCCGGCCCCGGTCACGCCGCCGCCGGTCGACAAGAAATCCTGA
Upstream 100 bases:
>100_bases CGGCGCCGCTTCAAAAAAGCCATCCTGTTATGAATCAGTGAACACAACTGGTTTTGCGACCGGCACCATTGTCGGGACGC TGTCGAAGAAAGGTTTCCTA
Downstream 100 bases:
>100_bases CGGACGACAAACATGCCTGAAGCGGGCCTGGCCGAGGCTTTCGGCGTCACCGAAGAGGCGCGCGCAAAGATCAATCTCGC TTTGCATGTGACAGGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 610; Mature: 610
Protein sequence:
>610_residues MRQRIAIRLLTSAALAAVLSLGGVGGANAEDAAKPSDVAKTDSFDADSVTTFSGAFLAARTADVDHDYETAIELYKKALQ IEPGNPEIRQRLMISLLLNGDIKDGVKYANDLKGDPSVERITTIVRGMDAVRRDDYKTAESILKYNGPNDLDRMMNDLLL AWARVGAGRGKEALAMVEKMKGPDWVRIFQNYNAGAIAIATGDVKSARKHLNDAVLDKEGGATAPDTFMRAVMALARLEA TQGNKQKALDAVSVGDNLLPNYAPLNALRDSIEKDEKQEQQVKTAEEGAAGVLFSVGGALNRDGAEDIVSLYLQTANALD PNSADTLVLLGGIAEKQNQMDRAIALYKKVPENSPMRRISELQLGLALAQGGKVDEARKHLQALIASDPKDIRSYLAYGS VLSDAKDYEAMAANYDKAVDAIGPIPGRANWSVFFQRGIAYERLKKWDQAEPNFRKALELNPDQPQVLNYLGYSWIDMNR NLDEGLGMIKKAVDLRPDDGYIIDSLGWAYFRLNRFDDAVDELERAAQIKAGDATINDHLGDAYWRVGRKLEAVYQWNRA LASEPEAAEIPKIKDKVANGLPAVSDDAKAADKKQPDPAPVTPPPVDKKS
Sequences:
>Translated_610_residues MRQRIAIRLLTSAALAAVLSLGGVGGANAEDAAKPSDVAKTDSFDADSVTTFSGAFLAARTADVDHDYETAIELYKKALQ IEPGNPEIRQRLMISLLLNGDIKDGVKYANDLKGDPSVERITTIVRGMDAVRRDDYKTAESILKYNGPNDLDRMMNDLLL AWARVGAGRGKEALAMVEKMKGPDWVRIFQNYNAGAIAIATGDVKSARKHLNDAVLDKEGGATAPDTFMRAVMALARLEA TQGNKQKALDAVSVGDNLLPNYAPLNALRDSIEKDEKQEQQVKTAEEGAAGVLFSVGGALNRDGAEDIVSLYLQTANALD PNSADTLVLLGGIAEKQNQMDRAIALYKKVPENSPMRRISELQLGLALAQGGKVDEARKHLQALIASDPKDIRSYLAYGS VLSDAKDYEAMAANYDKAVDAIGPIPGRANWSVFFQRGIAYERLKKWDQAEPNFRKALELNPDQPQVLNYLGYSWIDMNR NLDEGLGMIKKAVDLRPDDGYIIDSLGWAYFRLNRFDDAVDELERAAQIKAGDATINDHLGDAYWRVGRKLEAVYQWNRA LASEPEAAEIPKIKDKVANGLPAVSDDAKAADKKQPDPAPVTPPPVDKKS >Mature_610_residues MRQRIAIRLLTSAALAAVLSLGGVGGANAEDAAKPSDVAKTDSFDADSVTTFSGAFLAARTADVDHDYETAIELYKKALQ IEPGNPEIRQRLMISLLLNGDIKDGVKYANDLKGDPSVERITTIVRGMDAVRRDDYKTAESILKYNGPNDLDRMMNDLLL AWARVGAGRGKEALAMVEKMKGPDWVRIFQNYNAGAIAIATGDVKSARKHLNDAVLDKEGGATAPDTFMRAVMALARLEA TQGNKQKALDAVSVGDNLLPNYAPLNALRDSIEKDEKQEQQVKTAEEGAAGVLFSVGGALNRDGAEDIVSLYLQTANALD PNSADTLVLLGGIAEKQNQMDRAIALYKKVPENSPMRRISELQLGLALAQGGKVDEARKHLQALIASDPKDIRSYLAYGS VLSDAKDYEAMAANYDKAVDAIGPIPGRANWSVFFQRGIAYERLKKWDQAEPNFRKALELNPDQPQVLNYLGYSWIDMNR NLDEGLGMIKKAVDLRPDDGYIIDSLGWAYFRLNRFDDAVDELERAAQIKAGDATINDHLGDAYWRVGRKLEAVYQWNRA LASEPEAAEIPKIKDKVANGLPAVSDDAKAADKKQPDPAPVTPPPVDKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
Organism=Drosophila melanogaster, GI161076610, Length=286, Percent_Identity=25.5244755244755, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI19920486, Length=286, Percent_Identity=25.5244755244755, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 66525; Mature: 66525
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRIAIRLLTSAALAAVLSLGGVGGANAEDAAKPSDVAKTDSFDADSVTTFSGAFLAAR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHC TADVDHDYETAIELYKKALQIEPGNPEIRQRLMISLLLNGDIKDGVKYANDLKGDPSVER CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH ITTIVRGMDAVRRDDYKTAESILKYNGPNDLDRMMNDLLLAWARVGAGRGKEALAMVEKM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH KGPDWVRIFQNYNAGAIAIATGDVKSARKHLNDAVLDKEGGATAPDTFMRAVMALARLEA CCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH TQGNKQKALDAVSVGDNLLPNYAPLNALRDSIEKDEKQEQQVKTAEEGAAGVLFSVGGAL CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCC NRDGAEDIVSLYLQTANALDPNSADTLVLLGGIAEKQNQMDRAIALYKKVPENSPMRRIS CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHH ELQLGLALAQGGKVDEARKHLQALIASDPKDIRSYLAYGSVLSDAKDYEAMAANYDKAVD HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGPIPGRANWSVFFQRGIAYERLKKWDQAEPNFRKALELNPDQPQVLNYLGYSWIDMNR HHCCCCCCCCHHHHHHHCHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHCCCEEECCC NLDEGLGMIKKAVDLRPDDGYIIDSLGWAYFRLNRFDDAVDELERAAQIKAGDATINDHL CHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH GDAYWRVGRKLEAVYQWNRALASEPEAAEIPKIKDKVANGLPAVSDDAKAADKKQPDPAP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCC VTPPPVDKKS CCCCCCCCCC >Mature Secondary Structure MRQRIAIRLLTSAALAAVLSLGGVGGANAEDAAKPSDVAKTDSFDADSVTTFSGAFLAAR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHC TADVDHDYETAIELYKKALQIEPGNPEIRQRLMISLLLNGDIKDGVKYANDLKGDPSVER CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH ITTIVRGMDAVRRDDYKTAESILKYNGPNDLDRMMNDLLLAWARVGAGRGKEALAMVEKM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH KGPDWVRIFQNYNAGAIAIATGDVKSARKHLNDAVLDKEGGATAPDTFMRAVMALARLEA CCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH TQGNKQKALDAVSVGDNLLPNYAPLNALRDSIEKDEKQEQQVKTAEEGAAGVLFSVGGAL CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCC NRDGAEDIVSLYLQTANALDPNSADTLVLLGGIAEKQNQMDRAIALYKKVPENSPMRRIS CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHH ELQLGLALAQGGKVDEARKHLQALIASDPKDIRSYLAYGSVLSDAKDYEAMAANYDKAVD HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGPIPGRANWSVFFQRGIAYERLKKWDQAEPNFRKALELNPDQPQVLNYLGYSWIDMNR HHCCCCCCCCHHHHHHHCHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHCCCEEECCC NLDEGLGMIKKAVDLRPDDGYIIDSLGWAYFRLNRFDDAVDELERAAQIKAGDATINDHL CHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH GDAYWRVGRKLEAVYQWNRALASEPEAAEIPKIKDKVANGLPAVSDDAKAADKKQPDPAP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCC VTPPPVDKKS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883699; 10984043 [H]