| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is mutL [H]
Identifier: 209548102
GI number: 209548102
Start: 508411
End: 510213
Strand: Reverse
Name: mutL [H]
Synonym: Rleg2_0496
Alternate gene names: 209548102
Gene position: 510213-508411 (Counterclockwise)
Preceding gene: 209548105
Following gene: 209548101
Centisome position: 11.24
GC content: 67.28
Gene sequence:
>1803_bases ATGGCCATCAGACAGCTTTCCGAAACGCTCATAAACCAGATCGCCGCCGGCGAAGTCATCGAACGGCCGGCGAGCGCTGC CAAGGAACTGATCGAAAACGCGCTCGATGCGGGCGCGACGCGCATCGAGATCGCCACGGCGGGCGGCGGCAAGGCGTTGC TGCGGGTCAGCGACAACGGCTCGGGCATGGATGCGGCCGATCTGGAACTGGCGGTCAGGCGCCACTGCACCTCGAAACTA TCGGAGACGCTGGAGGATATCCGCACGCTCGGTTTCCGCGGCGAGGCGCTGCCGTCGATCGGCTCGGTCGCAAGGCTCAG CATCGCCAGCCGCAGGCGCGACAGCGCCGGCGGCCACGAGATCGCCGTCAACGCCGGCAAGGTCGCACATTTGCGCCCGG CCGCCGCCAATCCCGGGACGATCGTCGAAGTGCGCGATCTTTTTTTCGCGACCCCCGCCCGGCTCAAATTCCTGAAGACC GAGAAGGCCGAGGCCGGCGCCATTACCGAGATCGTCAAGCGCATGGCGATCGCCTTTCCCGCCGTGCGCTTCGTGCTGTC CGGTTCCGACCGCACGACGCTGGAATTTCCGGCGACCGGCGACGACCATCTGGCGCGCATGGCGCAGGTGCTCGGCAAGG ACTTCCGCGACAACGCCATCGCCCTCGACGCGGTGCGCGAGGAAATTTCACTCACCGGCTTTGCCGGCGTGCCGACTTTC AATCGCGGCAACTCCGCCCATCAATACGCCTTCGTCAACGGCCGGCCGGTGCAGGACAAGCTGATCCTGTCGGCGATCCG CGGCGCCTATGCCGAAACCATCCCGTCAGGCCGTCATCCGGTGGCGGTGCTGTCGATTACCCTCGATCCCGCCCTCGTCG ACGTCAACGTGCATCCGGCAAAATCCGACGTGCGGTTTCGCGACCCCGGCCTGGTGCGCGGCCTGATCGTCGGCGCCATC CGCGAGGCCCTGGCGCGCGACGGCAGCCGGGCGGCAACGACCGGGGCAAGCGACATGCTGCGCTCCTTCCGCCCCGGCTT TCAGCCGCAGGCGCAGCGACCGCAGACGGCATGGTCGGCCGAGACCTCGCCCTTCCGGCCCTACCAGCCGACAACGGGTT TTTCCGAACGGCCACAGGCCTCCTTCGACGGGCTGTCGATGCCGACGGCGCGGGCCGAGCCGCCGTTTTCGCCGCAGCCG GCAGCAGCCGACACCACCGCACGCTATCCGCTCGGCGCGGCGCGGGCGCAGATTCACGCCAACTACATCGTCGCCCAGAC CGAGGACGGGCTTGTCATCGTCGACCAGCATGCCGCCCATGAGCGGCTGGTGTTCGAGGCGATGCGCAAGGCGCTGCATT CGAAGCGGCTGGCCTCGCAGGTGCTGCTCATCCCGGAGATCGTCGATATTCCAGAAGAGGATTGTGACCGGCTGATGCAG CATGCGGCGGAACTTGCCGAACTCGGCCTGGCAATCGAGCGTTTCGGCCCCGGGGCGATTGCCGTGCGCGAGACGCCGGC GATGCTCGGCGAAGTCGACGCGCATGGCCTGATCCGCCAGCTTGCCGACGAGATTGCCGAATGGGACACGGCGTCGGGCC TGTCGGCCAAGCTCGAATATGTGGCGGCGACGATGGCCTGCCACGGGTCGGTGCGCTCCGGACGGCGGCTGCGGCCGGAG GAAATGAACGCGCTGCTCAGGGAAATGGAAGTGACGCCCGGCTCCGGCCAGTGCAATCACGGCCGGCCGACCTATATCGA ATTGAAGCTCAGCGATATCGAGCGGCTCTTCGGCAGAAGCTGA
Upstream 100 bases:
>100_bases ATGCAGCGGTGATCCCCAAGTTGCGGGAGGCCCGGATCACGCTTTGGGAAAGCCTATCGAACCCTCTTCCCTCCAGCCCG CGAATCCTCGAAAATAGCCC
Downstream 100 bases:
>100_bases AAAAGCTGGAAAAGCCGCCTCTGCCGGAGTATGGCAAACGGATGAGAGGCTGCAGGGAACGGAGCGCATGAATTTGTTCG AAGGGCACGGAAACCGCGAG
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MAIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKALLRVSDNGSGMDAADLELAVRRHCTSKL SETLEDIRTLGFRGEALPSIGSVARLSIASRRRDSAGGHEIAVNAGKVAHLRPAAANPGTIVEVRDLFFATPARLKFLKT EKAEAGAITEIVKRMAIAFPAVRFVLSGSDRTTLEFPATGDDHLARMAQVLGKDFRDNAIALDAVREEISLTGFAGVPTF NRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRHPVAVLSITLDPALVDVNVHPAKSDVRFRDPGLVRGLIVGAI REALARDGSRAATTGASDMLRSFRPGFQPQAQRPQTAWSAETSPFRPYQPTTGFSERPQASFDGLSMPTARAEPPFSPQP AAADTTARYPLGAARAQIHANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIVDIPEEDCDRLMQ HAAELAELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEWDTASGLSAKLEYVAATMACHGSVRSGRRLRPE EMNALLREMEVTPGSGQCNHGRPTYIELKLSDIERLFGRS
Sequences:
>Translated_600_residues MAIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKALLRVSDNGSGMDAADLELAVRRHCTSKL SETLEDIRTLGFRGEALPSIGSVARLSIASRRRDSAGGHEIAVNAGKVAHLRPAAANPGTIVEVRDLFFATPARLKFLKT EKAEAGAITEIVKRMAIAFPAVRFVLSGSDRTTLEFPATGDDHLARMAQVLGKDFRDNAIALDAVREEISLTGFAGVPTF NRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRHPVAVLSITLDPALVDVNVHPAKSDVRFRDPGLVRGLIVGAI REALARDGSRAATTGASDMLRSFRPGFQPQAQRPQTAWSAETSPFRPYQPTTGFSERPQASFDGLSMPTARAEPPFSPQP AAADTTARYPLGAARAQIHANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIVDIPEEDCDRLMQ HAAELAELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEWDTASGLSAKLEYVAATMACHGSVRSGRRLRPE EMNALLREMEVTPGSGQCNHGRPTYIELKLSDIERLFGRS >Mature_599_residues AIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKALLRVSDNGSGMDAADLELAVRRHCTSKLS ETLEDIRTLGFRGEALPSIGSVARLSIASRRRDSAGGHEIAVNAGKVAHLRPAAANPGTIVEVRDLFFATPARLKFLKTE KAEAGAITEIVKRMAIAFPAVRFVLSGSDRTTLEFPATGDDHLARMAQVLGKDFRDNAIALDAVREEISLTGFAGVPTFN RGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRHPVAVLSITLDPALVDVNVHPAKSDVRFRDPGLVRGLIVGAIR EALARDGSRAATTGASDMLRSFRPGFQPQAQRPQTAWSAETSPFRPYQPTTGFSERPQASFDGLSMPTARAEPPFSPQPA AADTTARYPLGAARAQIHANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIVDIPEEDCDRLMQH AAELAELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEWDTASGLSAKLEYVAATMACHGSVRSGRRLRPEE MNALLREMEVTPGSGQCNHGRPTYIELKLSDIERLFGRS
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=313, Percent_Identity=35.7827476038339, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI4505911, Length=324, Percent_Identity=31.7901234567901, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI189458898, Length=324, Percent_Identity=31.7901234567901, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI4505913, Length=343, Percent_Identity=27.4052478134111, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310128478, Length=343, Percent_Identity=27.4052478134111, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI189458896, Length=316, Percent_Identity=30.0632911392405, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI263191589, Length=218, Percent_Identity=28.8990825688073, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI310128480, Length=295, Percent_Identity=25.4237288135593, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI91992160, Length=361, Percent_Identity=25.207756232687, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI91992162, Length=361, Percent_Identity=25.207756232687, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI1790612, Length=561, Percent_Identity=33.3333333333333, Blast_Score=238, Evalue=9e-64, Organism=Caenorhabditis elegans, GI71991825, Length=322, Percent_Identity=35.0931677018634, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17562796, Length=338, Percent_Identity=26.9230769230769, Blast_Score=122, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6323819, Length=437, Percent_Identity=31.5789473684211, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6324247, Length=333, Percent_Identity=28.8288288288288, Blast_Score=123, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6325093, Length=725, Percent_Identity=20.9655172413793, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6323063, Length=347, Percent_Identity=26.2247838616715, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI17136968, Length=336, Percent_Identity=35.4166666666667, Blast_Score=191, Evalue=2e-48, Organism=Drosophila melanogaster, GI17136970, Length=347, Percent_Identity=27.0893371757925, Blast_Score=110, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 64497; Mature: 64366
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKALLRVSDNG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCC SGMDAADLELAVRRHCTSKLSETLEDIRTLGFRGEALPSIGSVARLSIASRRRDSAGGHE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE IAVNAGKVAHLRPAAANPGTIVEVRDLFFATPARLKFLKTEKAEAGAITEIVKRMAIAFP EEEECCCEEEECCCCCCCCCEEEEHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AVRFVLSGSDRTTLEFPATGDDHLARMAQVLGKDFRDNAIALDAVREEISLTGFAGVPTF HHHHEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCEECCCCCC NRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRHPVAVLSITLDPALVDVNVHPA CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEECCCC KSDVRFRDPGLVRGLIVGAIREALARDGSRAATTGASDMLRSFRPGFQPQAQRPQTAWSA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCC ETSPFRPYQPTTGFSERPQASFDGLSMPTARAEPPFSPQPAAADTTARYPLGAARAQIHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEE NYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIVDIPEEDCDRLMQ EEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH HAAELAELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEWDTASGLSAKLEY HHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH VAATMACHGSVRSGRRLRPEEMNALLREMEVTPGSGQCNHGRPTYIELKLSDIERLFGRS HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCC >Mature Secondary Structure AIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKALLRVSDNG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCC SGMDAADLELAVRRHCTSKLSETLEDIRTLGFRGEALPSIGSVARLSIASRRRDSAGGHE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE IAVNAGKVAHLRPAAANPGTIVEVRDLFFATPARLKFLKTEKAEAGAITEIVKRMAIAFP EEEECCCEEEECCCCCCCCCEEEEHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AVRFVLSGSDRTTLEFPATGDDHLARMAQVLGKDFRDNAIALDAVREEISLTGFAGVPTF HHHHEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCEECCCCCC NRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRHPVAVLSITLDPALVDVNVHPA CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEECCCC KSDVRFRDPGLVRGLIVGAIREALARDGSRAATTGASDMLRSFRPGFQPQAQRPQTAWSA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCC ETSPFRPYQPTTGFSERPQASFDGLSMPTARAEPPFSPQPAAADTTARYPLGAARAQIHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEE NYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIVDIPEEDCDRLMQ EEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH HAAELAELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEWDTASGLSAKLEY HHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH VAATMACHGSVRSGRRLRPEEMNALLREMEVTPGSGQCNHGRPTYIELKLSDIERLFGRS HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA