| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548095
Identifier: 209548095
GI number: 209548095
Start: 502196
End: 502918
Strand: Direct
Name: 209548095
Synonym: Rleg2_0489
Alternate gene names: NA
Gene position: 502196-502918 (Clockwise)
Preceding gene: 209548094
Following gene: 209548096
Centisome position: 11.07
GC content: 64.04
Gene sequence:
>723_bases ATGGCGGCAGCGTCCCTTATCAAAGGCATTCTCTTCGACAAGGACGGCACGCTGCTCGACTATGACGAGAGCTGGCTGCC GGTAAACCGCGAGCTTGCCCGTATCGCCGCCGAGGGGGATCCGCTTCTCGCCGACCGGCTGCTGTCGGCCTGCGGCATGG ATCCGGTAACCGGCCATATCGTTCCCGACAGCCTGCTTGCCGCCGGCAATACCCGCCAGATTGCCGAGGGCCTGGTTGCA GCGGGCTCGATGGTCGATGTCGTCGAACTGACGGTTCGCCTCGACGAGCTGTTTTCCAACGCCGCCGAGTTTTCCGTGCC GGTGACCGATCTCGCCGGCTTCTTTGCGAGACTGCATCGACGCGGCTTCAAGCTCGGCGTCGCCTCCAGCGACAATGAGC GTTCGATCCGCCAGACGGCGGAACGTTTCGGTTTCGCCCGCTATGTCGATTATATCGCCGGATATGACAGCGGTTTCGGC GTCAAGCCGGAACCGGGCATGGTGCTCGGCTTCTGCGCCGCGACCGGCCTTTCGCCCGAGGAAGTGGCGATGGTCGGCGA CAACAATCACGATCTGCATATGGGCCTGAATGCCGGAACGGGGCTAAGGATCGCGGTGCTGACCGGCACCGGTTCGCGCG ATTCGCTGGCCGCTGCCGCCCATCATGTGCTCGACGATATCACCGCGCTCGAGACGCTGCTGCCGGATCTGCAGCCGGCC TGA
Upstream 100 bases:
>100_bases GCTGACCGCGACCGTCAAGGGGCTGGAACCCTATATCAATCCGCTGACGGTGAAGGCGCGGCTGCTGCCCAAGGCCGTGG CCCAGCTCTGAGGATAAAGC
Downstream 100 bases:
>100_bases CGGGTAAGGGCTTGCATTTTCATTGATTTTGGCTTCTCAATCCGGCCGGTCGAAAAGCAAGAGGCTGGCTGCCGCAAGGC GGGCAGGGGAGCGGAACGGC
Product: HAD-superfamily hydrolase
Products: glycolate; phosphate
Alternate protein names: Phosphoglycolate Phosphatase; Haloacid Dehalogenase-Like Hydrolase; Phosphatase; HAD Superfamily Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase Family Protein; Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; HAD-Superfamily Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; HAD-Like Hydrolase; Phosphoglycolate Phosphatase Protein
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MAAASLIKGILFDKDGTLLDYDESWLPVNRELARIAAEGDPLLADRLLSACGMDPVTGHIVPDSLLAAGNTRQIAEGLVA AGSMVDVVELTVRLDELFSNAAEFSVPVTDLAGFFARLHRRGFKLGVASSDNERSIRQTAERFGFARYVDYIAGYDSGFG VKPEPGMVLGFCAATGLSPEEVAMVGDNNHDLHMGLNAGTGLRIAVLTGTGSRDSLAAAAHHVLDDITALETLLPDLQPA
Sequences:
>Translated_240_residues MAAASLIKGILFDKDGTLLDYDESWLPVNRELARIAAEGDPLLADRLLSACGMDPVTGHIVPDSLLAAGNTRQIAEGLVA AGSMVDVVELTVRLDELFSNAAEFSVPVTDLAGFFARLHRRGFKLGVASSDNERSIRQTAERFGFARYVDYIAGYDSGFG VKPEPGMVLGFCAATGLSPEEVAMVGDNNHDLHMGLNAGTGLRIAVLTGTGSRDSLAAAAHHVLDDITALETLLPDLQPA >Mature_239_residues AAASLIKGILFDKDGTLLDYDESWLPVNRELARIAAEGDPLLADRLLSACGMDPVTGHIVPDSLLAAGNTRQIAEGLVAA GSMVDVVELTVRLDELFSNAAEFSVPVTDLAGFFARLHRRGFKLGVASSDNERSIRQTAERFGFARYVDYIAGYDSGFGV KPEPGMVLGFCAATGLSPEEVAMVGDNNHDLHMGLNAGTGLRIAVLTGTGSRDSLAAAAHHVLDDITALETLLPDLQPA
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI71983424, Length=233, Percent_Identity=30.9012875536481, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17567717, Length=210, Percent_Identity=27.1428571428571, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18
Molecular weight: Translated: 25366; Mature: 25235
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAASLIKGILFDKDGTLLDYDESWLPVNRELARIAAEGDPLLADRLLSACGMDPVTGHI CCHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC VPDSLLAAGNTRQIAEGLVAAGSMVDVVELTVRLDELFSNAAEFSVPVTDLAGFFARLHR CCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHH RGFKLGVASSDNERSIRQTAERFGFARYVDYIAGYDSGFGVKPEPGMVLGFCAATGLSPE CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHCCCCHH EVAMVGDNNHDLHMGLNAGTGLRIAVLTGTGSRDSLAAAAHHVLDDITALETLLPDLQPA HEEEECCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AAASLIKGILFDKDGTLLDYDESWLPVNRELARIAAEGDPLLADRLLSACGMDPVTGHI CHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC VPDSLLAAGNTRQIAEGLVAAGSMVDVVELTVRLDELFSNAAEFSVPVTDLAGFFARLHR CCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHH RGFKLGVASSDNERSIRQTAERFGFARYVDYIAGYDSGFGVKPEPGMVLGFCAATGLSPE CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHCCCCHH EVAMVGDNNHDLHMGLNAGTGLRIAVLTGTGSRDSLAAAAHHVLDDITALETLLPDLQPA HEEEECCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-phosphoglycolate; H2O
Specific reaction: 2-phosphoglycolate + H2O = glycolate + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA