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The map label for this gene is ychK [C]

Identifier: 209548086

GI number: 209548086

Start: 491440

End: 492321

Strand: Direct

Name: ychK [C]

Synonym: Rleg2_0479

Alternate gene names: 209548086

Gene position: 491440-492321 (Clockwise)

Preceding gene: 209548085

Following gene: 209548088

Centisome position: 10.83

GC content: 64.4

Gene sequence:

>882_bases
GTGCAGCAGGCAGAGATCATCAGCCCGAAACTGCCTGCGATCAGCGACCTTCCGACGGTCGCCGTCGCTTTCGGCGGCGG
CGGCGCGCGCGGACTTGCCCACATCCATATCATCGAGACGCTCGACGAACTCGGCATCCGCCCGGTGGCGATATCGGGTT
CGTCGATGGGCGCGATCATGGGGGCCGGCATGGCCGCCGGCATGTCGGGGGCCGAAATCCGCGAACATGCGCTGACGACC
GTCGGCAACAAGACGGCGGTCGTCGCCCGCATCTGGGGCCTGCGGCCGGCGACGGTGCGCGATGCGGTGGCCAAGGGCAT
CCGCATCGGCCAGTTCAATCTGGAGCGGATCCTGAAAGCCTTTCTGCCGGCCGAGCTGCCGGCCCGCTTCGAGGATCTGC
TGGTGCCGATGAAGGTTATCACCACGGATTATTACGGACAGAACGAAGTCATCATCGAAGACGGCGAGCTGTTTCCGGCA
CTCGCCGCCTCTTCCGCCATTCCAGCCGTCTTCATGCCGGTGCGCCTGCGCGGCCGCGTGATGATCGACGGCGGCATCAG
CAATCCGGTGCCCTATGAACCACTGATGGATCTTGCCGATATCGTCATCGGCATCGATGTCGTCGGCGCGCCGGAAGGCG
ACGGCACCCATATTCCGAACCGCATGGAAAGCATCTTCGGTTCCGGCCAGCTGATGATGCAGACGGCGATCACGCTGAAG
CTGAAACTCTGCCAGCCGCACATCTTCCTGCGCCCGGCCGTCGGCCGCACCGGCGTCATGGATTTCCTCAAGGCCCGCGA
AGTCCTGGCCATGTCGATCGGCGTCAAGGACGAGCTGAAATTCGCCCTCGACCGCGAGATCGAGGCGCGGCTGAAGAGGT
AA

Upstream 100 bases:

>100_bases
GTATCCGTGCATCCTTCCTATGTTTTCCTCGAAAACCGCATCTTTGGCGATACGAGGGTGCATTTCTTCCGGTATCAACC
GCAATAAGCGGGGGCGGGGC

Downstream 100 bases:

>100_bases
TGGCCTCTTCAGTCAGATGAGAAGAGACCCGAAGGCGACTTCGACAAATGCTCTCAGCGGCTCATCGCTCTTCTCCACGC
GCATGCGCAGCAATGCGCCT

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQQAEIISPKLPAISDLPTVAVAFGGGGARGLAHIHIIETLDELGIRPVAISGSSMGAIMGAGMAAGMSGAEIREHALTT
VGNKTAVVARIWGLRPATVRDAVAKGIRIGQFNLERILKAFLPAELPARFEDLLVPMKVITTDYYGQNEVIIEDGELFPA
LAASSAIPAVFMPVRLRGRVMIDGGISNPVPYEPLMDLADIVIGIDVVGAPEGDGTHIPNRMESIFGSGQLMMQTAITLK
LKLCQPHIFLRPAVGRTGVMDFLKAREVLAMSIGVKDELKFALDREIEARLKR

Sequences:

>Translated_293_residues
MQQAEIISPKLPAISDLPTVAVAFGGGGARGLAHIHIIETLDELGIRPVAISGSSMGAIMGAGMAAGMSGAEIREHALTT
VGNKTAVVARIWGLRPATVRDAVAKGIRIGQFNLERILKAFLPAELPARFEDLLVPMKVITTDYYGQNEVIIEDGELFPA
LAASSAIPAVFMPVRLRGRVMIDGGISNPVPYEPLMDLADIVIGIDVVGAPEGDGTHIPNRMESIFGSGQLMMQTAITLK
LKLCQPHIFLRPAVGRTGVMDFLKAREVLAMSIGVKDELKFALDREIEARLKR
>Mature_293_residues
MQQAEIISPKLPAISDLPTVAVAFGGGGARGLAHIHIIETLDELGIRPVAISGSSMGAIMGAGMAAGMSGAEIREHALTT
VGNKTAVVARIWGLRPATVRDAVAKGIRIGQFNLERILKAFLPAELPARFEDLLVPMKVITTDYYGQNEVIIEDGELFPA
LAASSAIPAVFMPVRLRGRVMIDGGISNPVPYEPLMDLADIVIGIDVVGAPEGDGTHIPNRMESIFGSGQLMMQTAITLK
LKLCQPHIFLRPAVGRTGVMDFLKAREVLAMSIGVKDELKFALDREIEARLKR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI116256487, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI260656039, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI260656037, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI260656043, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31337; Mature: 31337

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQAEIISPKLPAISDLPTVAVAFGGGGARGLAHIHIIETLDELGIRPVAISGSSMGAIM
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHCCEEEEECCCCCHHHH
GAGMAAGMSGAEIREHALTTVGNKTAVVARIWGLRPATVRDAVAKGIRIGQFNLERILKA
HCHHHCCCCCHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHCCEEECCCCHHHHHHH
FLPAELPARFEDLLVPMKVITTDYYGQNEVIIEDGELFPALAASSAIPAVFMPVRLRGRV
HCCCCCCHHHHHHHHHHHHEEECCCCCCEEEEECCCCCHHHHHCCCCCEEEEEEEECCEE
MIDGGISNPVPYEPLMDLADIVIGIDVVGAPEGDGTHIPNRMESIFGSGQLMMQTAITLK
EECCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEEEEEE
LKLCQPHIFLRPAVGRTGVMDFLKAREVLAMSIGVKDELKFALDREIEARLKR
EEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQQAEIISPKLPAISDLPTVAVAFGGGGARGLAHIHIIETLDELGIRPVAISGSSMGAIM
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHCCEEEEECCCCCHHHH
GAGMAAGMSGAEIREHALTTVGNKTAVVARIWGLRPATVRDAVAKGIRIGQFNLERILKA
HCHHHCCCCCHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHCCEEECCCCHHHHHHH
FLPAELPARFEDLLVPMKVITTDYYGQNEVIIEDGELFPALAASSAIPAVFMPVRLRGRV
HCCCCCCHHHHHHHHHHHHEEECCCCCCEEEEECCCCCHHHHHCCCCCEEEEEEEECCEE
MIDGGISNPVPYEPLMDLADIVIGIDVVGAPEGDGTHIPNRMESIFGSGQLMMQTAITLK
EECCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEEEEEE
LKLCQPHIFLRPAVGRTGVMDFLKAREVLAMSIGVKDELKFALDREIEARLKR
EEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]