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The map label for this gene is rfbA [H]

Identifier: 209548014

GI number: 209548014

Start: 418019

End: 418897

Strand: Direct

Name: rfbA [H]

Synonym: Rleg2_0406

Alternate gene names: 209548014

Gene position: 418019-418897 (Clockwise)

Preceding gene: 209548013

Following gene: 209548015

Centisome position: 9.21

GC content: 54.15

Gene sequence:

>879_bases
ATGACAGAGCACCTGAAAGGACCAGCCTCGGCACGTGCCGATGACGATTGGGATATCGTTATCAAGCCTTCCAAGGGCAA
TACGCCGGATCTCGGCCTTGTCTGGCAATATCGCGATCTCGTCTGGATGTTTTTCAAGCGGGATTTCACGACATTCTACA
AACAGACCATTCTCGGGCCGGTCTGGTACATCATTCAACCGTCGCTGACGGCCATGACCTATTATGTCGTGTTCGGAAAA
ATCGCCAATCTTTCCACCGATGGCCTTCCGCCCTTCCTGTTTTACATGTCGGGCACGATCATCTGGAGCTACTTTGCTGC
CTGTCTGACCAATAACTCCGAGGTCTTCTCGAAGAACGCCAATCTGTTCGGAAAGGTTTATTTTCCGAGGCTTGTGGTGC
CGCTGTCCGTTGCGATGAGCGGCCTTGTCGCCTTTGCGATCCAGTTCCTGCTGTTGTTGACGGTTTCCATTGGCTTGAAA
ATTGCCAATCCCGATCTCGCTCTGAACTATTGGTTCCTGTTGCTGACGCCGCTGGTGCTGCTCTATATCGCCGTGCTCGG
CATTGGTGCCGGGCTTGTCGTTTCGGCGCTAACGGTCCGTTTCCGAGATCTTGTCTACGCCGTCGGGTTCATGACGCAAC
TCTGGATGTATGGCACGCCGATCGTGTACCCCTTCAGCCAGATCCCGGAACGGTATCATTGGTTCTATTACCTCAATCCA
ATGACGACGCCGGTTCAAACCTTCCGCTGGGCGCTATTCGACGCTCCCGCCTTGCCCATCGGTCTTTGCCTCGCCAATTT
TGCAGTGACGATCGCAATCACCCTGTTCGGCCTGGCACTTTTTTCGCGGGCGGAAGCCAATGCGATGGATACCGTCTGA

Upstream 100 bases:

>100_bases
CGGAGCTGAGCCTGCCTATTTCCGCCGGGCATAGAAAGGATGAGATAGAGCGCGTCTGCAGCCTTCTTGCGGCGCTCCCG
GAAAAGCTGAAGTTGGCGGC

Downstream 100 bases:

>100_bases
TGAACGACATCGTTATTCGAGCAGAGCACGTCAGCAAGCTCTATCGTCTTGGCGTGATCAATCACGGCACCCTCTATCGC
GACCTTCAAAGCTGGTGGGC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTEHLKGPASARADDDWDIVIKPSKGNTPDLGLVWQYRDLVWMFFKRDFTTFYKQTILGPVWYIIQPSLTAMTYYVVFGK
IANLSTDGLPPFLFYMSGTIIWSYFAACLTNNSEVFSKNANLFGKVYFPRLVVPLSVAMSGLVAFAIQFLLLLTVSIGLK
IANPDLALNYWFLLLTPLVLLYIAVLGIGAGLVVSALTVRFRDLVYAVGFMTQLWMYGTPIVYPFSQIPERYHWFYYLNP
MTTPVQTFRWALFDAPALPIGLCLANFAVTIAITLFGLALFSRAEANAMDTV

Sequences:

>Translated_292_residues
MTEHLKGPASARADDDWDIVIKPSKGNTPDLGLVWQYRDLVWMFFKRDFTTFYKQTILGPVWYIIQPSLTAMTYYVVFGK
IANLSTDGLPPFLFYMSGTIIWSYFAACLTNNSEVFSKNANLFGKVYFPRLVVPLSVAMSGLVAFAIQFLLLLTVSIGLK
IANPDLALNYWFLLLTPLVLLYIAVLGIGAGLVVSALTVRFRDLVYAVGFMTQLWMYGTPIVYPFSQIPERYHWFYYLNP
MTTPVQTFRWALFDAPALPIGLCLANFAVTIAITLFGLALFSRAEANAMDTV
>Mature_291_residues
TEHLKGPASARADDDWDIVIKPSKGNTPDLGLVWQYRDLVWMFFKRDFTTFYKQTILGPVWYIIQPSLTAMTYYVVFGKI
ANLSTDGLPPFLFYMSGTIIWSYFAACLTNNSEVFSKNANLFGKVYFPRLVVPLSVAMSGLVAFAIQFLLLLTVSIGLKI
ANPDLALNYWFLLLTPLVLLYIAVLGIGAGLVVSALTVRFRDLVYAVGFMTQLWMYGTPIVYPFSQIPERYHWFYYLNPM
TTPVQTFRWALFDAPALPIGLCLANFAVTIAITLFGLALFSRAEANAMDTV

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 32882; Mature: 32751

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHLKGPASARADDDWDIVIKPSKGNTPDLGLVWQYRDLVWMFFKRDFTTFYKQTILGP
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VWYIIQPSLTAMTYYVVFGKIANLSTDGLPPFLFYMSGTIIWSYFAACLTNNSEVFSKNA
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
NLFGKVYFPRLVVPLSVAMSGLVAFAIQFLLLLTVSIGLKIANPDLALNYWFLLLTPLVL
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHH
LYIAVLGIGAGLVVSALTVRFRDLVYAVGFMTQLWMYGTPIVYPFSQIPERYHWFYYLNP
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHCCCCEEEEEEECC
MTTPVQTFRWALFDAPALPIGLCLANFAVTIAITLFGLALFSRAEANAMDTV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TEHLKGPASARADDDWDIVIKPSKGNTPDLGLVWQYRDLVWMFFKRDFTTFYKQTILGP
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VWYIIQPSLTAMTYYVVFGKIANLSTDGLPPFLFYMSGTIIWSYFAACLTNNSEVFSKNA
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
NLFGKVYFPRLVVPLSVAMSGLVAFAIQFLLLLTVSIGLKIANPDLALNYWFLLLTPLVL
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHH
LYIAVLGIGAGLVVSALTVRFRDLVYAVGFMTQLWMYGTPIVYPFSQIPERYHWFYYLNP
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHCCCCEEEEEEECC
MTTPVQTFRWALFDAPALPIGLCLANFAVTIAITLFGLALFSRAEANAMDTV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7533882 [H]