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The map label for this gene is degT [H]

Identifier: 209548013

GI number: 209548013

Start: 416916

End: 418022

Strand: Direct

Name: degT [H]

Synonym: Rleg2_0405

Alternate gene names: 209548013

Gene position: 416916-418022 (Clockwise)

Preceding gene: 209548012

Following gene: 209548014

Centisome position: 9.19

GC content: 55.83

Gene sequence:

>1107_bases
ATGATTGAGTATGAAAGTCTTGCGCAGGCCAACCGCGCGCTGATGGAAGAGTTGGAGGCGGTTGCTTCCCGTGTCATTCG
TTCCGGGTGGTACATACTTGGCAATGAGGTCTCCTCGTTCGAGGCCGAATTCGCCGCCTTTGCGGAAAGCAAACATTGCA
TCAGCGTGGCCAATGGTCTGGATGCGTTGATCCTGTCGATCGAAGCGCTCGATCTGCCGAAAGGCAGCGAGATCATGGTG
GCCTCCAATACCTATATAGCCACTATTCTGGCAATTCTTCGCGCCGGCCACAAACCCGTTCTGGTGGAGCCCGAACGCGA
AACCTTCAACATCGATCCGGAGCGCCTTGCAGCGGCGGTCACTCGCCACACGCAAGCAATCTGTGTGACGCATCTTTTCG
GCAAATCCTGCCGGATGACTGAGATCGCCGCGTTTGCAAGCGAGCATGGTCTCAAGGTGATCGAGGATTGCGCGCAGTCT
CATGGCGCGCGCTATGACGGCAAGCTGACCGGCACCTTCGGAATTGCCGGCTGCTTCAGCTTCTATCCGACCAAGAATCT
CGGAGCTCTCGGAGATGCGGGCGCGATCGTCACGGATGATGACGAATTTGCAGATCGCTTAAGACACATGCGCAACTACG
GCTCGAAGAAGAAATATGAGAACGTCTATATCGGTGTAAATTCCAGGCTTGATGAGATGCAGGCGGCATTCCTGCGCGTC
AAACTGCGTTACCTCGATCAGGTGACTGAACATAAGCGGGCGCTGGCCGATATCTATTTTGCCAATCTGCCCAAATGGCT
GGCCCAGCCGCTTCGTCGACCTGCCGAGTATGACGTGTTTCATATTTTCGGGATACGTCACCCGGCCCGCGACGAATTGC
GTCAGTGGCTGCTCGATAACGGAGTCAAGACCGAGATACATTATCCGATCGCGCCGCATCGGCAGAAGGCAATGCAAGGC
ATTCTTTCCGGCGATTATCCCATTGCCGATGAGCTGCATGCCACGGAGCTGAGCCTGCCTATTTCCGCCGGGCATAGAAA
GGATGAGATAGAGCGCGTCTGCAGCCTTCTTGCGGCGCTCCCGGAAAAGCTGAAGTTGGCGGCATGA

Upstream 100 bases:

>100_bases
CACGAAATGACCTTTGGTCCCGGTTCGATCCTGCTCGTTTTTGCCTCTCGCGGATATGATAAGGATGATTACATCGACAC
TCCCTATGAACGGCTCTGAG

Downstream 100 bases:

>100_bases
CAGAGCACCTGAAAGGACCAGCCTCGGCACGTGCCGATGACGATTGGGATATCGTTATCAAGCCTTCCAAGGGCAATACG
CCGGATCTCGGCCTTGTCTG

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MIEYESLAQANRALMEELEAVASRVIRSGWYILGNEVSSFEAEFAAFAESKHCISVANGLDALILSIEALDLPKGSEIMV
ASNTYIATILAILRAGHKPVLVEPERETFNIDPERLAAAVTRHTQAICVTHLFGKSCRMTEIAAFASEHGLKVIEDCAQS
HGARYDGKLTGTFGIAGCFSFYPTKNLGALGDAGAIVTDDDEFADRLRHMRNYGSKKKYENVYIGVNSRLDEMQAAFLRV
KLRYLDQVTEHKRALADIYFANLPKWLAQPLRRPAEYDVFHIFGIRHPARDELRQWLLDNGVKTEIHYPIAPHRQKAMQG
ILSGDYPIADELHATELSLPISAGHRKDEIERVCSLLAALPEKLKLAA

Sequences:

>Translated_368_residues
MIEYESLAQANRALMEELEAVASRVIRSGWYILGNEVSSFEAEFAAFAESKHCISVANGLDALILSIEALDLPKGSEIMV
ASNTYIATILAILRAGHKPVLVEPERETFNIDPERLAAAVTRHTQAICVTHLFGKSCRMTEIAAFASEHGLKVIEDCAQS
HGARYDGKLTGTFGIAGCFSFYPTKNLGALGDAGAIVTDDDEFADRLRHMRNYGSKKKYENVYIGVNSRLDEMQAAFLRV
KLRYLDQVTEHKRALADIYFANLPKWLAQPLRRPAEYDVFHIFGIRHPARDELRQWLLDNGVKTEIHYPIAPHRQKAMQG
ILSGDYPIADELHATELSLPISAGHRKDEIERVCSLLAALPEKLKLAA
>Mature_368_residues
MIEYESLAQANRALMEELEAVASRVIRSGWYILGNEVSSFEAEFAAFAESKHCISVANGLDALILSIEALDLPKGSEIMV
ASNTYIATILAILRAGHKPVLVEPERETFNIDPERLAAAVTRHTQAICVTHLFGKSCRMTEIAAFASEHGLKVIEDCAQS
HGARYDGKLTGTFGIAGCFSFYPTKNLGALGDAGAIVTDDDEFADRLRHMRNYGSKKKYENVYIGVNSRLDEMQAAFLRV
KLRYLDQVTEHKRALADIYFANLPKWLAQPLRRPAEYDVFHIFGIRHPARDELRQWLLDNGVKTEIHYPIAPHRQKAMQG
ILSGDYPIADELHATELSLPISAGHRKDEIERVCSLLAALPEKLKLAA

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=362, Percent_Identity=30.1104972375691, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI2367285, Length=203, Percent_Identity=34.4827586206897, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40992; Mature: 40992

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEYESLAQANRALMEELEAVASRVIRSGWYILGNEVSSFEAEFAAFAESKHCISVANGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCHHHHHHCCH
DALILSIEALDLPKGSEIMVASNTYIATILAILRAGHKPVLVEPERETFNIDPERLAAAV
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHH
TRHTQAICVTHLFGKSCRMTEIAAFASEHGLKVIEDCAQSHGARYDGKLTGTFGIAGCFS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHH
FYPTKNLGALGDAGAIVTDDDEFADRLRHMRNYGSKKKYENVYIGVNSRLDEMQAAFLRV
HCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHH
KLRYLDQVTEHKRALADIYFANLPKWLAQPLRRPAEYDVFHIFGIRHPARDELRQWLLDN
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCC
GVKTEIHYPIAPHRQKAMQGILSGDYPIADELHATELSLPISAGHRKDEIERVCSLLAAL
CCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHC
PEKLKLAA
HHHHHCCC
>Mature Secondary Structure
MIEYESLAQANRALMEELEAVASRVIRSGWYILGNEVSSFEAEFAAFAESKHCISVANGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCHHHHHHCCH
DALILSIEALDLPKGSEIMVASNTYIATILAILRAGHKPVLVEPERETFNIDPERLAAAV
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHH
TRHTQAICVTHLFGKSCRMTEIAAFASEHGLKVIEDCAQSHGARYDGKLTGTFGIAGCFS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHH
FYPTKNLGALGDAGAIVTDDDEFADRLRHMRNYGSKKKYENVYIGVNSRLDEMQAAFLRV
HCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHH
KLRYLDQVTEHKRALADIYFANLPKWLAQPLRRPAEYDVFHIFGIRHPARDELRQWLLDN
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCC
GVKTEIHYPIAPHRQKAMQGILSGDYPIADELHATELSLPISAGHRKDEIERVCSLLAAL
CCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHC
PEKLKLAA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]