| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is wcaE [C]
Identifier: 209548010
GI number: 209548010
Start: 414564
End: 415352
Strand: Reverse
Name: wcaE [C]
Synonym: Rleg2_0402
Alternate gene names: 209548010
Gene position: 415352-414564 (Counterclockwise)
Preceding gene: 209548037
Following gene: 209548006
Centisome position: 9.15
GC content: 56.53
Gene sequence:
>789_bases ATGGCCGCAAACACTGCCGATCCACGCCCGCCTCGGATAAGCCTCATCACTGTTTGCTGGAACGCCGAGCGGACCATTGC CGATACGCTGCGGTCCATCGACACGCAAACCTACCGCGATTTCGAGCACATCATCATTGACGGTGGCTCAAGCGATTCCA CGCTCGCCATCATTGCTTCGGCGCCGGCGGAGAACCGTCGCGTAGTTTCGGGACGGGACGGAGGTATCTATGAGGCCATG AACAAGGGGATCGGCCTTGCGAGCGGCGACATCATCGGCTTCTTGAACGCGGATGATACTTTCGAGAGCAGCGGCTCCCT CGAAACCGTGGCGGCCGCGCTGGACGATGAAGCTTATGACGGCTGCTATGGCGATCTCATCTATGTTTCCAACCAGCATC CGGATCGCACAGTCCGTTATTGGAAATCCTGTGCGTTTGAACCCGGTTTTTTTAGACGCGGCTGGTGTCCGCCGCATCCG ACATTCTATGTTCGGCGTCGCATCTATGACCGGTTCGGGACGTTCGATCTGCGTTATCGGCTGGCAGCCGACGTCGAGCT TATGATGCGTTTTCTGGAAGTTGCGCGCATCAGGACCGTTTATATTCCCCGCGTGTTGGTGAGGATGCGCTTGGGGGGCG CCACAAACAAGAACGTTCAGAACATATCGCGTCAGAACAAGGAAGTGCTGCGTGCCCTTGCTGACCACGGCTTAAGGGTC TCGATTCTCATGTTCTGGGCATCGAAGCTTGTGAACCGTCTTGGTCAGTTCGTGAAACGAAATCGATAG
Upstream 100 bases:
>100_bases TCCAGGATAATCTGCAGTACTGGATTGCGACACCGCCTTTTCGTCTGCTACGGCTTGGCCAGATTTCGCCCCTTAGAATG TGAGCAAGACACCCGTCAAA
Downstream 100 bases:
>100_bases CAGGTTTATCACGTCCGATCTCGCTCGGGCCAATAGCGGGTCAGGCCGCCACCCTCCCCCACACCTCATCGGCAATCGCC GTCATCCTGTCCGCCTCGGC
Product: family 2 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MAANTADPRPPRISLITVCWNAERTIADTLRSIDTQTYRDFEHIIIDGGSSDSTLAIIASAPAENRRVVSGRDGGIYEAM NKGIGLASGDIIGFLNADDTFESSGSLETVAAALDDEAYDGCYGDLIYVSNQHPDRTVRYWKSCAFEPGFFRRGWCPPHP TFYVRRRIYDRFGTFDLRYRLAADVELMMRFLEVARIRTVYIPRVLVRMRLGGATNKNVQNISRQNKEVLRALADHGLRV SILMFWASKLVNRLGQFVKRNR
Sequences:
>Translated_262_residues MAANTADPRPPRISLITVCWNAERTIADTLRSIDTQTYRDFEHIIIDGGSSDSTLAIIASAPAENRRVVSGRDGGIYEAM NKGIGLASGDIIGFLNADDTFESSGSLETVAAALDDEAYDGCYGDLIYVSNQHPDRTVRYWKSCAFEPGFFRRGWCPPHP TFYVRRRIYDRFGTFDLRYRLAADVELMMRFLEVARIRTVYIPRVLVRMRLGGATNKNVQNISRQNKEVLRALADHGLRV SILMFWASKLVNRLGQFVKRNR >Mature_261_residues AANTADPRPPRISLITVCWNAERTIADTLRSIDTQTYRDFEHIIIDGGSSDSTLAIIASAPAENRRVVSGRDGGIYEAMN KGIGLASGDIIGFLNADDTFESSGSLETVAAALDDEAYDGCYGDLIYVSNQHPDRTVRYWKSCAFEPGFFRRGWCPPHPT FYVRRRIYDRFGTFDLRYRLAADVELMMRFLEVARIRTVYIPRVLVRMRLGGATNKNVQNISRQNKEVLRALADHGLRVS ILMFWASKLVNRLGQFVKRNR
Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 29649; Mature: 29518
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANTADPRPPRISLITVCWNAERTIADTLRSIDTQTYRDFEHIIIDGGSSDSTLAIIAS CCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEEEE APAENRRVVSGRDGGIYEAMNKGIGLASGDIIGFLNADDTFESSGSLETVAAALDDEAYD CCCCCCEEECCCCCCHHHHHHCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHCCHHCC GCYGDLIYVSNQHPDRTVRYWKSCAFEPGFFRRGWCPPHPTFYVRRRIYDRFGTFDLRYR CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEE LAADVELMMRFLEVARIRTVYIPRVLVRMRLGGATNKNVQNISRQNKEVLRALADHGLRV HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH SILMFWASKLVNRLGQFVKRNR HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AANTADPRPPRISLITVCWNAERTIADTLRSIDTQTYRDFEHIIIDGGSSDSTLAIIAS CCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEEEE APAENRRVVSGRDGGIYEAMNKGIGLASGDIIGFLNADDTFESSGSLETVAAALDDEAYD CCCCCCEEECCCCCCHHHHHHCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHCCHHCC GCYGDLIYVSNQHPDRTVRYWKSCAFEPGFFRRGWCPPHPTFYVRRRIYDRFGTFDLRYR CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEE LAADVELMMRFLEVARIRTVYIPRVLVRMRLGGATNKNVQNISRQNKEVLRALADHGLRV HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH SILMFWASKLVNRLGQFVKRNR HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]