| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is folD1 [H]
Identifier: 209547961
GI number: 209547961
Start: 355831
End: 356730
Strand: Direct
Name: folD1 [H]
Synonym: Rleg2_0353
Alternate gene names: 209547961
Gene position: 355831-356730 (Clockwise)
Preceding gene: 209547960
Following gene: 209547963
Centisome position: 7.84
GC content: 64.67
Gene sequence:
>900_bases GTGACGACAGTAATCGACGGCAAGAACGTAGCTGCATCGGTCATTCAGACGGTCAAGAGTGCGACGGCAGCGCTGGAAAA GAGCAGCGGCGTCACCACCGGTCTTGCGGTCGTCATCGTCGGTGACGATCCGGCAAGTCACGCCTATGTCGGCTCCAAGG GCCGCATGGCCAAGGAATGCGGCTTCAAATCGGTCCAGCACACACTGCCGGCCGAGACCAGCCAGGAGGAGCTGGCAGCC CTCGTCGCCACCCTCAACGCCGATCCGTCGATCCACGGCATCCTGGTGCAATTGCCGCTGCCGAAGCCGCTCGACAGCGA GCCGATCATCCAATCGATCCTGCCGGAAAAGGATGTCGACGGCTTGAGCATTGCCAATGCCGGCAAGCTTGCCATCGGCG ACCTGAAGACCGGACTGGTCTCCTGCACGCCGGCCGGCGCCATGGTCTTCGTCCGCCGCACCCATGGCGAGGATCTCTCC GGCCTCAACGCCGTCGTCATCGGCCGCTCCAACCTGTTCGGCAAGCCGATGGCGCAATTGCTGCTCAATGCCAATGCGAC GGTGACGATCGCGCATTCGAGAACCAAGAACCTCGCCGAGGTCTGCCGCAATGCCGATATTCTGGTCGCCGCCGTCGGCC GGCCGGAGATGGTCAAGGCCGATTGGGTCAAGCCGGGTGCGACGGTCATCGACGTCGGCATCAACCGCGTGCCAGCCCCC GAAAGAGGCGAGGGCAAGACCCGGCTCGTCGGCGACGTCGCCTTCGACGAGGTCTTTGCGGTCGCCAGCACCATCACCCC GGTTCCCGGTGGTGTCGGGCCGATGACCATCGCCATGCTGATGGCCAATACGGTCATCGCCGCCCATCGCGCCGCAGGGC AGACCCCGCCGCAGTTCTGA
Upstream 100 bases:
>100_bases TTGATATTGCCTTGCTGCTTTCCGACAGGATAGGGCGTTAGCGGGCATTTGACGCTCGCCGACTATCCATAGATTGGCGC GAAACAGGGCGGAGAGACGC
Downstream 100 bases:
>100_bases TTAATGCATGTCGCCCGGAAGTGTGCAGCGGTTTTCCCAGGCAAAGCGCGAAGCGCTTTTGCCGCAAACGACATGCATAA AACAAAGAGCTAAAGCAAGG
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTTVIDGKNVAASVIQTVKSATAALEKSSGVTTGLAVVIVGDDPASHAYVGSKGRMAKECGFKSVQHTLPAETSQEELAA LVATLNADPSIHGILVQLPLPKPLDSEPIIQSILPEKDVDGLSIANAGKLAIGDLKTGLVSCTPAGAMVFVRRTHGEDLS GLNAVVIGRSNLFGKPMAQLLLNANATVTIAHSRTKNLAEVCRNADILVAAVGRPEMVKADWVKPGATVIDVGINRVPAP ERGEGKTRLVGDVAFDEVFAVASTITPVPGGVGPMTIAMLMANTVIAAHRAAGQTPPQF
Sequences:
>Translated_299_residues MTTVIDGKNVAASVIQTVKSATAALEKSSGVTTGLAVVIVGDDPASHAYVGSKGRMAKECGFKSVQHTLPAETSQEELAA LVATLNADPSIHGILVQLPLPKPLDSEPIIQSILPEKDVDGLSIANAGKLAIGDLKTGLVSCTPAGAMVFVRRTHGEDLS GLNAVVIGRSNLFGKPMAQLLLNANATVTIAHSRTKNLAEVCRNADILVAAVGRPEMVKADWVKPGATVIDVGINRVPAP ERGEGKTRLVGDVAFDEVFAVASTITPVPGGVGPMTIAMLMANTVIAAHRAAGQTPPQF >Mature_298_residues TTVIDGKNVAASVIQTVKSATAALEKSSGVTTGLAVVIVGDDPASHAYVGSKGRMAKECGFKSVQHTLPAETSQEELAAL VATLNADPSIHGILVQLPLPKPLDSEPIIQSILPEKDVDGLSIANAGKLAIGDLKTGLVSCTPAGAMVFVRRTHGEDLSG LNAVVIGRSNLFGKPMAQLLLNANATVTIAHSRTKNLAEVCRNADILVAAVGRPEMVKADWVKPGATVIDVGINRVPAPE RGEGKTRLVGDVAFDEVFAVASTITPVPGGVGPMTIAMLMANTVIAAHRAAGQTPPQF
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=297, Percent_Identity=46.4646464646465, Blast_Score=257, Evalue=1e-68, Organism=Homo sapiens, GI222418558, Length=297, Percent_Identity=42.7609427609428, Blast_Score=202, Evalue=3e-52, Organism=Homo sapiens, GI94721354, Length=297, Percent_Identity=42.7609427609428, Blast_Score=198, Evalue=4e-51, Organism=Homo sapiens, GI36796743, Length=225, Percent_Identity=28.4444444444444, Blast_Score=88, Evalue=1e-17, Organism=Escherichia coli, GI1786741, Length=285, Percent_Identity=47.719298245614, Blast_Score=237, Evalue=7e-64, Organism=Caenorhabditis elegans, GI17568735, Length=292, Percent_Identity=42.4657534246575, Blast_Score=208, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6319558, Length=288, Percent_Identity=45.8333333333333, Blast_Score=246, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6321643, Length=296, Percent_Identity=41.2162162162162, Blast_Score=214, Evalue=2e-56, Organism=Drosophila melanogaster, GI62472483, Length=290, Percent_Identity=47.2413793103448, Blast_Score=249, Evalue=1e-66, Organism=Drosophila melanogaster, GI45551871, Length=290, Percent_Identity=47.2413793103448, Blast_Score=249, Evalue=1e-66, Organism=Drosophila melanogaster, GI24645718, Length=290, Percent_Identity=47.2413793103448, Blast_Score=249, Evalue=1e-66, Organism=Drosophila melanogaster, GI17137370, Length=290, Percent_Identity=47.2413793103448, Blast_Score=249, Evalue=1e-66, Organism=Drosophila melanogaster, GI17136818, Length=301, Percent_Identity=46.1794019933555, Blast_Score=228, Evalue=3e-60, Organism=Drosophila melanogaster, GI17136816, Length=301, Percent_Identity=46.1794019933555, Blast_Score=228, Evalue=3e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30813; Mature: 30682
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVIDGKNVAASVIQTVKSATAALEKSSGVTTGLAVVIVGDDPASHAYVGSKGRMAKEC CCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEECCCCCCHHHH GFKSVQHTLPAETSQEELAALVATLNADPSIHGILVQLPLPKPLDSEPIIQSILPEKDVD CHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCCC GLSIANAGKLAIGDLKTGLVSCTPAGAMVFVRRTHGEDLSGLNAVVIGRSNLFGKPMAQL CCEECCCCCEEECCCCCCEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCHHHHH LLNANATVTIAHSRTKNLAEVCRNADILVAAVGRPEMVKADWVKPGATVIDVGINRVPAP HHCCCCEEEEEECCCHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCC ERGEGKTRLVGDVAFDEVFAVASTITPVPGGVGPMTIAMLMANTVIAAHRAAGQTPPQF CCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTVIDGKNVAASVIQTVKSATAALEKSSGVTTGLAVVIVGDDPASHAYVGSKGRMAKEC CEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEECCCCCCHHHH GFKSVQHTLPAETSQEELAALVATLNADPSIHGILVQLPLPKPLDSEPIIQSILPEKDVD CHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCCC GLSIANAGKLAIGDLKTGLVSCTPAGAMVFVRRTHGEDLSGLNAVVIGRSNLFGKPMAQL CCEECCCCCEEECCCCCCEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCHHHHH LLNANATVTIAHSRTKNLAEVCRNADILVAAVGRPEMVKADWVKPGATVIDVGINRVPAP HHCCCCEEEEEECCCHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCC ERGEGKTRLVGDVAFDEVFAVASTITPVPGGVGPMTIAMLMANTVIAAHRAAGQTPPQF CCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA