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The map label for this gene is 209547884

Identifier: 209547884

GI number: 209547884

Start: 281193

End: 282047

Strand: Reverse

Name: 209547884

Synonym: Rleg2_0276

Alternate gene names: NA

Gene position: 282047-281193 (Counterclockwise)

Preceding gene: 209547885

Following gene: 209547882

Centisome position: 6.22

GC content: 60.0

Gene sequence:

>855_bases
ATGGCCGCGCGGGCAAGCTGGAAAGGTCATCTGAAGGTAGGCGACCTTGCCTGCGCCGTCGGGCTTTACACCGCCATCTC
CTCCTCCGACCGCGTCTCCTTCAACATCATCAATCGCAGGACCGGTCATCGGGTAGAGCGGCAATTCATCGACAGCGAGA
CCGGCAAACCGGTCGAGCGGGACGACCAGGTCAAGGGCTACCAGCTGGAGAATGGCGATTACATCGTCATCGAGGGAGAC
GAGATCGCCGCACTCATGCCGGAAAGCGACAAGGTGCTGAATATCAAGGCCTTCATCGCCTATGACGGCATCGACAAGCT
CTATTTCGACCGTCCTTACTATCTCGCGCCCGTGGACGAACATGATGAAGAGGCGCTGGCGCTGATTGCCAGGGGCATGC
TTGACGGCAAGGTCGCAGCACTTGCCGAAGCCGTTCTTTTCCGACGCAACCGGACGCTGCTGATCCGCCCGCAAGGTGAC
CACATCGTCGCGACGATGCTGAACTTCGACTACGAGGTGCGCTCCGCCGAAAGCGTCTTCGACGACATTCCCGACATTAA
ATTCGACAAGGAGATGCTCGAACTCGCAGGCCATATCCTCAAGACCAAGCAAGGCAGCTTCGAGCCGAGCGAATATGAGG
ATCGTTACGAGGCTGCCCTTGTCGAGTTGGTGAAGGCGAAAATCGAGGGCCGGGCACCGCCAAAGAAGAAACAGCCGCCA
GAACGCAAGGTCGTCGACCTGATGGAGGCGCTGCGACAAAGCGCCGGGGTGAGCGGCAAGGCCACTGCAAAGAAGGCGCC
GGCGAAGAAGGCGCCGGCACGCAGCGACAGCCGCGGAACCAAGAAGGCGAGCTGA

Upstream 100 bases:

>100_bases
GCTGCTCGCCTATCCCGCGCCCGACGGCCGCGGCTGGGCCTTTCAGGAACTCGAAACCGACAAGAGCAACAGTCGGCTCT
GATTTGCGACGGAGGATGGA

Downstream 100 bases:

>100_bases
GCTGGCTCTTGAAACCTGTCGGCCCCGACGTTTTCGCTAATGCGGTTTGCGCCCGTCATCCGCGGCAAGGCTCTTCTTCA
GCGCATCCATGATGTTGATG

Product: Ku protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MAARASWKGHLKVGDLACAVGLYTAISSSDRVSFNIINRRTGHRVERQFIDSETGKPVERDDQVKGYQLENGDYIVIEGD
EIAALMPESDKVLNIKAFIAYDGIDKLYFDRPYYLAPVDEHDEEALALIARGMLDGKVAALAEAVLFRRNRTLLIRPQGD
HIVATMLNFDYEVRSAESVFDDIPDIKFDKEMLELAGHILKTKQGSFEPSEYEDRYEAALVELVKAKIEGRAPPKKKQPP
ERKVVDLMEALRQSAGVSGKATAKKAPAKKAPARSDSRGTKKAS

Sequences:

>Translated_284_residues
MAARASWKGHLKVGDLACAVGLYTAISSSDRVSFNIINRRTGHRVERQFIDSETGKPVERDDQVKGYQLENGDYIVIEGD
EIAALMPESDKVLNIKAFIAYDGIDKLYFDRPYYLAPVDEHDEEALALIARGMLDGKVAALAEAVLFRRNRTLLIRPQGD
HIVATMLNFDYEVRSAESVFDDIPDIKFDKEMLELAGHILKTKQGSFEPSEYEDRYEAALVELVKAKIEGRAPPKKKQPP
ERKVVDLMEALRQSAGVSGKATAKKAPAKKAPARSDSRGTKKAS
>Mature_283_residues
AARASWKGHLKVGDLACAVGLYTAISSSDRVSFNIINRRTGHRVERQFIDSETGKPVERDDQVKGYQLENGDYIVIEGDE
IAALMPESDKVLNIKAFIAYDGIDKLYFDRPYYLAPVDEHDEEALALIARGMLDGKVAALAEAVLFRRNRTLLIRPQGDH
IVATMLNFDYEVRSAESVFDDIPDIKFDKEMLELAGHILKTKQGSFEPSEYEDRYEAALVELVKAKIEGRAPPKKKQPPE
RKVVDLMEALRQSAGVSGKATAKKAPAKKAPARSDSRGTKKAS

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 31581; Mature: 31450

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARASWKGHLKVGDLACAVGLYTAISSSDRVSFNIINRRTGHRVERQFIDSETGKPVER
CCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC
DDQVKGYQLENGDYIVIEGDEIAALMPESDKVLNIKAFIAYDGIDKLYFDRPYYLAPVDE
CCCCCCEEECCCCEEEEECCCEEEECCCCCCEEEEEEEEEECCCHHHHCCCCEEECCCCC
HDEEALALIARGMLDGKVAALAEAVLFRRNRTLLIRPQGDHIVATMLNFDYEVRSAESVF
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCHHHHHHHHH
DDIPDIKFDKEMLELAGHILKTKQGSFEPSEYEDRYEAALVELVKAKIEGRAPPKKKQPP
HHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ERKVVDLMEALRQSAGVSGKATAKKAPAKKAPARSDSRGTKKAS
HHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AARASWKGHLKVGDLACAVGLYTAISSSDRVSFNIINRRTGHRVERQFIDSETGKPVER
CCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC
DDQVKGYQLENGDYIVIEGDEIAALMPESDKVLNIKAFIAYDGIDKLYFDRPYYLAPVDE
CCCCCCEEECCCCEEEEECCCEEEECCCCCCEEEEEEEEEECCCHHHHCCCCEEECCCCC
HDEEALALIARGMLDGKVAALAEAVLFRRNRTLLIRPQGDHIVATMLNFDYEVRSAESVF
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCHHHHHHHHH
DDIPDIKFDKEMLELAGHILKTKQGSFEPSEYEDRYEAALVELVKAKIEGRAPPKKKQPP
HHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ERKVVDLMEALRQSAGVSGKATAKKAPAKKAPARSDSRGTKKAS
HHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA