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The map label for this gene is exoQ [H]

Identifier: 209547882

GI number: 209547882

Start: 278535

End: 279869

Strand: Reverse

Name: exoQ [H]

Synonym: Rleg2_0274

Alternate gene names: 209547882

Gene position: 279869-278535 (Counterclockwise)

Preceding gene: 209547884

Following gene: 209547879

Centisome position: 6.17

GC content: 52.66

Gene sequence:

>1335_bases
ATGACGATAGAAGATGCAGGTTTAGCAAGAAACCACTATCCGGCTGGTTACCACCGGCGGTCTGTGCCCCGGTGGCGCGT
CAGACGCGATGTGCTGGCAAAGCTCGTTCTTACGATCGCGTTTTACGCGTCTCTTTGGCGGGCCACGAGCATGTGGTACG
GCCTTCCTGCAAACTTCGAAGACGGCGCGGCAGTCGATCCGCTGCCGATGAAGCTAATGCTCTACAGCCTTATTCCTTTG
TCAGGCTTGTATTTTCTGTTGGAGCAAAGGCAGTTCCTGCGGGTCTTTTCAAGGATTTCTCCATTCATCGTCGTTGTTGG
CATTTCCTGCCTGACATCAATCGTCTTCTCGATCGAACGGGGTGCATCCGTAAAAGGATTGGCAGCGGTCATCGTTCTCG
CAATCCCACCTCTTCTCTATCGCGCGCGCTACGGCAACGTTGAAGCATTCCGCATAATCGGGCGCTTTGCGATAGCGGCG
GCATTTATCAACGTTCTCTACACAGTAGCTTTCCCGCAATTCGCAATTATGCGCGGTAGCTACGCGGGCATGGTCAAAGG
TGCTTTCTATCACAAGAACACGTTGGGGCAGTTTTGCTCGGTCAGCTTCGTCTGCCTGCTGTCGACGGAAAAACTAGGCC
GGCTTCGTTACAGTACCCTGATACGCTGGGCTGCGATGCTTTGCCTTCTCGCATTGATCGTGGCAACAAAGTCCTCGACA
GCTGTTGTCTTGACGATGTTCGGCAGCGTCATGCTGTACGGGATTCGCATCATACACATCTATCCGAACCGCCTTTTCCG
TTCCTTCGTCGTTTTCCTGTTGTTTGTGATCGTGGGATTCGCCGCCAGTTTCGTTTATCTGGGAGTGGCATCGGCTGTTG
CAGAAGCATTCGGCAAGGATATTACGTTCTCAGGACGAACCAATATTTGGGAACAGCTATTGCCATTGATATGGGATAGG
CCAATCACAGGTTATGGGTTTGCGATGTTTCGTCAACCCGAGGTCATGGAGGAATACGTCAAGGTTACCTTCGATGCGCG
TTCGACCCACAACACCTATCTCGAGCTAGCGCTTAACATCGGCATTCCAGGCGTTACGGCATGGACGTTGTTTTTGGTGA
CCCGCCTATTCAGGAAGATGACAATCGTTGACCGCGATCCGGCCGAATCCGGCGCCAGGAGAAAGGAGATTGTCATCATT
ATCCTTATCATGCTTGGAGCCATGACCGAGGCGGGCATGATGCTTGCGCCTTTCATTCTCTGGCCACACATGGTCATCGC
GCTCTCGGAACTTCGTCCCAGGTTGCGGACAAATCGGAATCTACACCAGACATAA

Upstream 100 bases:

>100_bases
ACACACAAAATCAGGTCCCGCCTCCGTTCAATCGAATCCCGGTATGCCTTGATCGTGGCGAACAGCCGGGTTTCCCCAGA
TTGATGATAAGAGCCCTTTA

Downstream 100 bases:

>100_bases
TGGGAAGACGTGCTCGGTGTCTTGGCGAGGAGAGCGCTCACACCGCGGCGTGCCGGGCGATTTAAATCGAGAGATAGCGC
TTCTGCCAAGGCAGCCTATG

Product: O-antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MTIEDAGLARNHYPAGYHRRSVPRWRVRRDVLAKLVLTIAFYASLWRATSMWYGLPANFEDGAAVDPLPMKLMLYSLIPL
SGLYFLLEQRQFLRVFSRISPFIVVVGISCLTSIVFSIERGASVKGLAAVIVLAIPPLLYRARYGNVEAFRIIGRFAIAA
AFINVLYTVAFPQFAIMRGSYAGMVKGAFYHKNTLGQFCSVSFVCLLSTEKLGRLRYSTLIRWAAMLCLLALIVATKSST
AVVLTMFGSVMLYGIRIIHIYPNRLFRSFVVFLLFVIVGFAASFVYLGVASAVAEAFGKDITFSGRTNIWEQLLPLIWDR
PITGYGFAMFRQPEVMEEYVKVTFDARSTHNTYLELALNIGIPGVTAWTLFLVTRLFRKMTIVDRDPAESGARRKEIVII
ILIMLGAMTEAGMMLAPFILWPHMVIALSELRPRLRTNRNLHQT

Sequences:

>Translated_444_residues
MTIEDAGLARNHYPAGYHRRSVPRWRVRRDVLAKLVLTIAFYASLWRATSMWYGLPANFEDGAAVDPLPMKLMLYSLIPL
SGLYFLLEQRQFLRVFSRISPFIVVVGISCLTSIVFSIERGASVKGLAAVIVLAIPPLLYRARYGNVEAFRIIGRFAIAA
AFINVLYTVAFPQFAIMRGSYAGMVKGAFYHKNTLGQFCSVSFVCLLSTEKLGRLRYSTLIRWAAMLCLLALIVATKSST
AVVLTMFGSVMLYGIRIIHIYPNRLFRSFVVFLLFVIVGFAASFVYLGVASAVAEAFGKDITFSGRTNIWEQLLPLIWDR
PITGYGFAMFRQPEVMEEYVKVTFDARSTHNTYLELALNIGIPGVTAWTLFLVTRLFRKMTIVDRDPAESGARRKEIVII
ILIMLGAMTEAGMMLAPFILWPHMVIALSELRPRLRTNRNLHQT
>Mature_443_residues
TIEDAGLARNHYPAGYHRRSVPRWRVRRDVLAKLVLTIAFYASLWRATSMWYGLPANFEDGAAVDPLPMKLMLYSLIPLS
GLYFLLEQRQFLRVFSRISPFIVVVGISCLTSIVFSIERGASVKGLAAVIVLAIPPLLYRARYGNVEAFRIIGRFAIAAA
FINVLYTVAFPQFAIMRGSYAGMVKGAFYHKNTLGQFCSVSFVCLLSTEKLGRLRYSTLIRWAAMLCLLALIVATKSSTA
VVLTMFGSVMLYGIRIIHIYPNRLFRSFVVFLLFVIVGFAASFVYLGVASAVAEAFGKDITFSGRTNIWEQLLPLIWDRP
ITGYGFAMFRQPEVMEEYVKVTFDARSTHNTYLELALNIGIPGVTAWTLFLVTRLFRKMTIVDRDPAESGARRKEIVIII
LIMLGAMTEAGMMLAPFILWPHMVIALSELRPRLRTNRNLHQT

Specific function: Involved in the production of exopolysaccharide [H]

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007016 [H]

Pfam domain/function: PF04932 Wzy_C [H]

EC number: NA

Molecular weight: Translated: 50033; Mature: 49902

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TIEDAGLARNHYPAGYHRRSVPRWRVRRDVLAKLVLTIAFYASLWRATSMWYGLPANFE
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC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HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]