| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209547867
Identifier: 209547867
GI number: 209547867
Start: 262438
End: 263871
Strand: Reverse
Name: 209547867
Synonym: Rleg2_0258
Alternate gene names: NA
Gene position: 263871-262438 (Counterclockwise)
Preceding gene: 209547879
Following gene: 209547866
Centisome position: 5.81
GC content: 58.58
Gene sequence:
>1434_bases ATGCACTATGCTTTGAAGGCTAGCGCGCTTGCGCTGACGCTCGGCCTCGCGACGACCGCTTCGCCGGCCTGGGCTGACTT CTGGTCCGACGCCGGCGCTAAATACAAGGGTGTGACACTGCACGGCGTCACCGAAAGTACCCCGCCATCGAACTACATCA AGAACGTGCTCGCTCCGGAATTCGAAAAGAAGACCGGCATCAAGGTCGAAATCGAGACGACCTCCTGGGATCAGATGTAC GACAAGGCGATCAAGGACATGGAAGCCAAGACCGGCATCTATGACATGGTCTACATCGAGCAGGACATCATCTATTCCTA TCTGGCCCGGAATTTCCTGGTCGACATCACCAAGACGCTGAAGGATCAGCCGGATCTGAAGGCGCCGACCTACGACGATG CGAATTTCACCAGCTTCGCCGACTACTTCAAGGATGCCAACGGCGACCTCTTCGGCACGCCGATGGAAGCGTTCCTGAAG ACATATCTCTATCGCAAGGACCTCTTCGACGATCCGAAGATCAAGGAGGCCTTCAAGAAGGAAACCGGCAAGGACCTGAA GCCGGCGACCACCCACGAGGAATACACTCAGATCGCCGAATTCTTCACGAAGTACGGCAAGGACAACGGCATGGAGCTCT GGGGCACGACCGCTCAGGCCCATACGGGCCATCCGGCGTCGTGGTATGAATTCTTCGAGTCCATCGTGCCGACGTTCGGG GTCTATAATTGGGGCATCGACGCCAAGAACAATTATGCGGCCACCGTCGAACACGGCGGCACGATGAATGGCGACAAGGC GAAGGCCGCGTTGAAATATTGGCTGCACCTGCGCGACATCGCTCCACCGGAATCGACCCAGTCGACCTGGACGGAAACGG CAACGACATTTGCCGCCGGCCGTGTCGCCCAGGGGTTGATCTACGGTGAAAATGCCGCGTGGATTGCAAGCGATGAAGCG CAATCGAAGGTCGTCGGAAAGGTCGGGTTCGCTCTGCCGCCGCTCGAGCCGGGCGTGCTGGACGATGCGAAAGCCGGAAA GGGCTATATCGGTTACTACGACGGCGGCGCCTTCGGCGTGCCGATTACGTCGAAGAACAAGGAAGCGTCGCTGCTGTTCC TCGAATTCATCGGTCAGAACGAAGTGCAGCCCGACTGGGCCATCGCCGCGCCGCGCATCACCAACAAGGCGACCTTCGAC GATCCGAAGGTAAAGGAGATGGATACCAAGCTCGGCGGCTTCTACACGATGCTGAAGGATGAGGGCAAACTCTTCGCCGG CGCTCCTCCCTACCCCTTCCATGCGCAGGTGCGGGAAGCGACCGCTCCGATCTTCTACGACATCCTGACCGGCAAAATCG CTCCCGATGAAGGCCTCGACCAGATGGCGGCCAAGGCCGAAGAGGAACTGACATCGCTCGGCTATCGCAAATAA
Upstream 100 bases:
>100_bases CATCTATTTGCATGTTTAGACAACAAATATTGCGCTGTTCGTTTTTTTGGCCTACACAAGCACCGGCGAATATTCTCGCT GCACTCTGGGAGGATTGGAA
Downstream 100 bases:
>100_bases ACATCCTCCCCAATTGACGGGTCGTGTCCTACGACCCGTCATCTTTCGCTCCAGGATGGGCGGACGTCACATAACGTTCA ATGGGGGATAGGCGATGCAT
Product: family 1 extracellular solute-binding protein
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter; Abc-Type Sugar Transport System Periplasmic Component
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MHYALKASALALTLGLATTASPAWADFWSDAGAKYKGVTLHGVTESTPPSNYIKNVLAPEFEKKTGIKVEIETTSWDQMY DKAIKDMEAKTGIYDMVYIEQDIIYSYLARNFLVDITKTLKDQPDLKAPTYDDANFTSFADYFKDANGDLFGTPMEAFLK TYLYRKDLFDDPKIKEAFKKETGKDLKPATTHEEYTQIAEFFTKYGKDNGMELWGTTAQAHTGHPASWYEFFESIVPTFG VYNWGIDAKNNYAATVEHGGTMNGDKAKAALKYWLHLRDIAPPESTQSTWTETATTFAAGRVAQGLIYGENAAWIASDEA QSKVVGKVGFALPPLEPGVLDDAKAGKGYIGYYDGGAFGVPITSKNKEASLLFLEFIGQNEVQPDWAIAAPRITNKATFD DPKVKEMDTKLGGFYTMLKDEGKLFAGAPPYPFHAQVREATAPIFYDILTGKIAPDEGLDQMAAKAEEELTSLGYRK
Sequences:
>Translated_477_residues MHYALKASALALTLGLATTASPAWADFWSDAGAKYKGVTLHGVTESTPPSNYIKNVLAPEFEKKTGIKVEIETTSWDQMY DKAIKDMEAKTGIYDMVYIEQDIIYSYLARNFLVDITKTLKDQPDLKAPTYDDANFTSFADYFKDANGDLFGTPMEAFLK TYLYRKDLFDDPKIKEAFKKETGKDLKPATTHEEYTQIAEFFTKYGKDNGMELWGTTAQAHTGHPASWYEFFESIVPTFG VYNWGIDAKNNYAATVEHGGTMNGDKAKAALKYWLHLRDIAPPESTQSTWTETATTFAAGRVAQGLIYGENAAWIASDEA QSKVVGKVGFALPPLEPGVLDDAKAGKGYIGYYDGGAFGVPITSKNKEASLLFLEFIGQNEVQPDWAIAAPRITNKATFD DPKVKEMDTKLGGFYTMLKDEGKLFAGAPPYPFHAQVREATAPIFYDILTGKIAPDEGLDQMAAKAEEELTSLGYRK >Mature_477_residues MHYALKASALALTLGLATTASPAWADFWSDAGAKYKGVTLHGVTESTPPSNYIKNVLAPEFEKKTGIKVEIETTSWDQMY DKAIKDMEAKTGIYDMVYIEQDIIYSYLARNFLVDITKTLKDQPDLKAPTYDDANFTSFADYFKDANGDLFGTPMEAFLK TYLYRKDLFDDPKIKEAFKKETGKDLKPATTHEEYTQIAEFFTKYGKDNGMELWGTTAQAHTGHPASWYEFFESIVPTFG VYNWGIDAKNNYAATVEHGGTMNGDKAKAALKYWLHLRDIAPPESTQSTWTETATTFAAGRVAQGLIYGENAAWIASDEA QSKVVGKVGFALPPLEPGVLDDAKAGKGYIGYYDGGAFGVPITSKNKEASLLFLEFIGQNEVQPDWAIAAPRITNKATFD DPKVKEMDTKLGGFYTMLKDEGKLFAGAPPYPFHAQVREATAPIFYDILTGKIAPDEGLDQMAAKAEEELTSLGYRK
Specific function: Unknown
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52803; Mature: 52803
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYALKASALALTLGLATTASPAWADFWSDAGAKYKGVTLHGVTESTPPSNYIKNVLAPE CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHCCC FEKKTGIKVEIETTSWDQMYDKAIKDMEAKTGIYDMVYIEQDIIYSYLARNFLVDITKTL CHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH KDQPDLKAPTYDDANFTSFADYFKDANGDLFGTPMEAFLKTYLYRKDLFDDPKIKEAFKK CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHH ETGKDLKPATTHEEYTQIAEFFTKYGKDNGMELWGTTAQAHTGHPASWYEFFESIVPTFG HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHC VYNWGIDAKNNYAATVEHGGTMNGDKAKAALKYWLHLRDIAPPESTQSTWTETATTFAAG EEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RVAQGLIYGENAAWIASDEAQSKVVGKVGFALPPLEPGVLDDAKAGKGYIGYYDGGAFGV HHHHCEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEC PITSKNKEASLLFLEFIGQNEVQPDWAIAAPRITNKATFDDPKVKEMDTKLGGFYTMLKD EECCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEEEC EGKLFAGAPPYPFHAQVREATAPIFYDILTGKIAPDEGLDQMAAKAEEELTSLGYRK CCCEEECCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHYALKASALALTLGLATTASPAWADFWSDAGAKYKGVTLHGVTESTPPSNYIKNVLAPE CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHCCC FEKKTGIKVEIETTSWDQMYDKAIKDMEAKTGIYDMVYIEQDIIYSYLARNFLVDITKTL CHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH KDQPDLKAPTYDDANFTSFADYFKDANGDLFGTPMEAFLKTYLYRKDLFDDPKIKEAFKK CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHHHH ETGKDLKPATTHEEYTQIAEFFTKYGKDNGMELWGTTAQAHTGHPASWYEFFESIVPTFG HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHC VYNWGIDAKNNYAATVEHGGTMNGDKAKAALKYWLHLRDIAPPESTQSTWTETATTFAAG EEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH RVAQGLIYGENAAWIASDEAQSKVVGKVGFALPPLEPGVLDDAKAGKGYIGYYDGGAFGV HHHHCEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEC PITSKNKEASLLFLEFIGQNEVQPDWAIAAPRITNKATFDDPKVKEMDTKLGGFYTMLKD EECCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEEEC EGKLFAGAPPYPFHAQVREATAPIFYDILTGKIAPDEGLDQMAAKAEEELTSLGYRK CCCEEECCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA