| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209547821
Identifier: 209547821
GI number: 209547821
Start: 213763
End: 214452
Strand: Reverse
Name: 209547821
Synonym: Rleg2_0212
Alternate gene names: NA
Gene position: 214452-213763 (Counterclockwise)
Preceding gene: 209547827
Following gene: 209547820
Centisome position: 4.73
GC content: 63.19
Gene sequence:
>690_bases ATGATCAGTTTCGAGGCGATAAGGCAGCGTGCAGAGCAGCGGAAAGGCGGCGCGGCCGTGCTGCAGGCGATGCTGGAAAA ACATCGGCCGGATCACGAGCGGCTCCGCGCCATGCCTGACGACCGCATCCTTGCCGATATGACCCGGCGTATCTTCTACA GCGGCTTCGTCCAGAAGGTGATCGATGCGAAGTGGCCGGGTTTCGAAGCGGCGTTTTCCGGTTTCGATCCGGCAACGCTG AATATCGCGCCCGACGATTATTGGCATGAGCTGACCTCGGACGAACGGATCATCCGCAACGGCGCGAAGATCATGTCGGT GCGCGCCAATGCCGCCTTTGTCCGGGAACTGGCGAAGGAACATGGCAGCGCCGGCGCCTTTTTCGCCGACTGGCCGCGGG AGGATCAGATCGGCCTTCTGGACCTGTTGAGCAAACGCGGCAGCCGGCTCGGCGGCATGACCGGGCAATATTTCCTGCGC GGCATCGGCCGCGACAGCTTCGTCGCAACGATGGACGTGCTCGCCTGCCTGCGATCGGCGGGCGTGCCGCTGTCTGCCTC CGGCACAGCGAAGAAAGACCAGCCGCTGATCCAGCAGGCCTTCAACCAATGGGCCGAGGAGACCGGCCTTTCCTTCATTC ACCTCTCGCGCATCAGCGCCTATTCGATCGATGCGGGAGGGCCGCACTGA
Upstream 100 bases:
>100_bases TGCTGCGGGCTGACGAGACGTCATCTCCCCTTCCTTGTCCATCGCGGAACGGCGTATAAGCGGGAAGGCTCTTTAAACCG CAGATCGGGAATGCTTCACG
Downstream 100 bases:
>100_bases AATTCCGGCCAGGGCGCTGGCACGAGCCATTGGCACTTCCTACCTCTTTCGGACGATCCACGCAGGAAGATACTCATGTC CGACTTTCCCTATGCCAGCG
Product: DNA glycosylase protein
Products: NA
Alternate protein names: DNA-3-Methyladenine Glycosylase; 3-Methyladenine DNA Glycosylase-Like Protein; 3-Methyl-Adenine DNA Glycosylase; DNA Glycosylase Protein; DNA-3-Methyladenine Glycosylase I; DNA-Glycosylase
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MISFEAIRQRAEQRKGGAAVLQAMLEKHRPDHERLRAMPDDRILADMTRRIFYSGFVQKVIDAKWPGFEAAFSGFDPATL NIAPDDYWHELTSDERIIRNGAKIMSVRANAAFVRELAKEHGSAGAFFADWPREDQIGLLDLLSKRGSRLGGMTGQYFLR GIGRDSFVATMDVLACLRSAGVPLSASGTAKKDQPLIQQAFNQWAEETGLSFIHLSRISAYSIDAGGPH
Sequences:
>Translated_229_residues MISFEAIRQRAEQRKGGAAVLQAMLEKHRPDHERLRAMPDDRILADMTRRIFYSGFVQKVIDAKWPGFEAAFSGFDPATL NIAPDDYWHELTSDERIIRNGAKIMSVRANAAFVRELAKEHGSAGAFFADWPREDQIGLLDLLSKRGSRLGGMTGQYFLR GIGRDSFVATMDVLACLRSAGVPLSASGTAKKDQPLIQQAFNQWAEETGLSFIHLSRISAYSIDAGGPH >Mature_229_residues MISFEAIRQRAEQRKGGAAVLQAMLEKHRPDHERLRAMPDDRILADMTRRIFYSGFVQKVIDAKWPGFEAAFSGFDPATL NIAPDDYWHELTSDERIIRNGAKIMSVRANAAFVRELAKEHGSAGAFFADWPREDQIGLLDLLSKRGSRLGGMTGQYFLR GIGRDSFVATMDVLACLRSAGVPLSASGTAKKDQPLIQQAFNQWAEETGLSFIHLSRISAYSIDAGGPH
Specific function: Unknown
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25397; Mature: 25397
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISFEAIRQRAEQRKGGAAVLQAMLEKHRPDHERLRAMPDDRILADMTRRIFYSGFVQKV CCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IDAKWPGFEAAFSGFDPATLNIAPDDYWHELTSDERIIRNGAKIMSVRANAAFVRELAKE HHCCCCCHHHHHCCCCCCEEECCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHH HGSAGAFFADWPREDQIGLLDLLSKRGSRLGGMTGQYFLRGIGRDSFVATMDVLACLRSA CCCCCCEECCCCCCCCHHHHHHHHHHCHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC GVPLSASGTAKKDQPLIQQAFNQWAEETGLSFIHLSRISAYSIDAGGPH CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHEECCCCCCC >Mature Secondary Structure MISFEAIRQRAEQRKGGAAVLQAMLEKHRPDHERLRAMPDDRILADMTRRIFYSGFVQKV CCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IDAKWPGFEAAFSGFDPATLNIAPDDYWHELTSDERIIRNGAKIMSVRANAAFVRELAKE HHCCCCCHHHHHCCCCCCEEECCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHH HGSAGAFFADWPREDQIGLLDLLSKRGSRLGGMTGQYFLRGIGRDSFVATMDVLACLRSA CCCCCCEECCCCCCCCHHHHHHHHHHCHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC GVPLSASGTAKKDQPLIQQAFNQWAEETGLSFIHLSRISAYSIDAGGPH CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA