Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

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The map label for this gene is 209547821

Identifier: 209547821

GI number: 209547821

Start: 213763

End: 214452

Strand: Reverse

Name: 209547821

Synonym: Rleg2_0212

Alternate gene names: NA

Gene position: 214452-213763 (Counterclockwise)

Preceding gene: 209547827

Following gene: 209547820

Centisome position: 4.73

GC content: 63.19

Gene sequence:

>690_bases
ATGATCAGTTTCGAGGCGATAAGGCAGCGTGCAGAGCAGCGGAAAGGCGGCGCGGCCGTGCTGCAGGCGATGCTGGAAAA
ACATCGGCCGGATCACGAGCGGCTCCGCGCCATGCCTGACGACCGCATCCTTGCCGATATGACCCGGCGTATCTTCTACA
GCGGCTTCGTCCAGAAGGTGATCGATGCGAAGTGGCCGGGTTTCGAAGCGGCGTTTTCCGGTTTCGATCCGGCAACGCTG
AATATCGCGCCCGACGATTATTGGCATGAGCTGACCTCGGACGAACGGATCATCCGCAACGGCGCGAAGATCATGTCGGT
GCGCGCCAATGCCGCCTTTGTCCGGGAACTGGCGAAGGAACATGGCAGCGCCGGCGCCTTTTTCGCCGACTGGCCGCGGG
AGGATCAGATCGGCCTTCTGGACCTGTTGAGCAAACGCGGCAGCCGGCTCGGCGGCATGACCGGGCAATATTTCCTGCGC
GGCATCGGCCGCGACAGCTTCGTCGCAACGATGGACGTGCTCGCCTGCCTGCGATCGGCGGGCGTGCCGCTGTCTGCCTC
CGGCACAGCGAAGAAAGACCAGCCGCTGATCCAGCAGGCCTTCAACCAATGGGCCGAGGAGACCGGCCTTTCCTTCATTC
ACCTCTCGCGCATCAGCGCCTATTCGATCGATGCGGGAGGGCCGCACTGA

Upstream 100 bases:

>100_bases
TGCTGCGGGCTGACGAGACGTCATCTCCCCTTCCTTGTCCATCGCGGAACGGCGTATAAGCGGGAAGGCTCTTTAAACCG
CAGATCGGGAATGCTTCACG

Downstream 100 bases:

>100_bases
AATTCCGGCCAGGGCGCTGGCACGAGCCATTGGCACTTCCTACCTCTTTCGGACGATCCACGCAGGAAGATACTCATGTC
CGACTTTCCCTATGCCAGCG

Product: DNA glycosylase protein

Products: NA

Alternate protein names: DNA-3-Methyladenine Glycosylase; 3-Methyladenine DNA Glycosylase-Like Protein; 3-Methyl-Adenine DNA Glycosylase; DNA Glycosylase Protein; DNA-3-Methyladenine Glycosylase I; DNA-Glycosylase

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MISFEAIRQRAEQRKGGAAVLQAMLEKHRPDHERLRAMPDDRILADMTRRIFYSGFVQKVIDAKWPGFEAAFSGFDPATL
NIAPDDYWHELTSDERIIRNGAKIMSVRANAAFVRELAKEHGSAGAFFADWPREDQIGLLDLLSKRGSRLGGMTGQYFLR
GIGRDSFVATMDVLACLRSAGVPLSASGTAKKDQPLIQQAFNQWAEETGLSFIHLSRISAYSIDAGGPH

Sequences:

>Translated_229_residues
MISFEAIRQRAEQRKGGAAVLQAMLEKHRPDHERLRAMPDDRILADMTRRIFYSGFVQKVIDAKWPGFEAAFSGFDPATL
NIAPDDYWHELTSDERIIRNGAKIMSVRANAAFVRELAKEHGSAGAFFADWPREDQIGLLDLLSKRGSRLGGMTGQYFLR
GIGRDSFVATMDVLACLRSAGVPLSASGTAKKDQPLIQQAFNQWAEETGLSFIHLSRISAYSIDAGGPH
>Mature_229_residues
MISFEAIRQRAEQRKGGAAVLQAMLEKHRPDHERLRAMPDDRILADMTRRIFYSGFVQKVIDAKWPGFEAAFSGFDPATL
NIAPDDYWHELTSDERIIRNGAKIMSVRANAAFVRELAKEHGSAGAFFADWPREDQIGLLDLLSKRGSRLGGMTGQYFLR
GIGRDSFVATMDVLACLRSAGVPLSASGTAKKDQPLIQQAFNQWAEETGLSFIHLSRISAYSIDAGGPH

Specific function: Unknown

COG id: COG2818

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25397; Mature: 25397

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFEAIRQRAEQRKGGAAVLQAMLEKHRPDHERLRAMPDDRILADMTRRIFYSGFVQKV
CCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IDAKWPGFEAAFSGFDPATLNIAPDDYWHELTSDERIIRNGAKIMSVRANAAFVRELAKE
HHCCCCCHHHHHCCCCCCEEECCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
HGSAGAFFADWPREDQIGLLDLLSKRGSRLGGMTGQYFLRGIGRDSFVATMDVLACLRSA
CCCCCCEECCCCCCCCHHHHHHHHHHCHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC
GVPLSASGTAKKDQPLIQQAFNQWAEETGLSFIHLSRISAYSIDAGGPH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHEECCCCCCC
>Mature Secondary Structure
MISFEAIRQRAEQRKGGAAVLQAMLEKHRPDHERLRAMPDDRILADMTRRIFYSGFVQKV
CCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IDAKWPGFEAAFSGFDPATLNIAPDDYWHELTSDERIIRNGAKIMSVRANAAFVRELAKE
HHCCCCCHHHHHCCCCCCEEECCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
HGSAGAFFADWPREDQIGLLDLLSKRGSRLGGMTGQYFLRGIGRDSFVATMDVLACLRSA
CCCCCCEECCCCCCCCHHHHHHHHHHCHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHC
GVPLSASGTAKKDQPLIQQAFNQWAEETGLSFIHLSRISAYSIDAGGPH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA