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The map label for this gene is osmF [H]

Identifier: 209547756

GI number: 209547756

Start: 140209

End: 141117

Strand: Reverse

Name: osmF [H]

Synonym: Rleg2_0145

Alternate gene names: 209547756

Gene position: 141117-140209 (Counterclockwise)

Preceding gene: 209547759

Following gene: 209547755

Centisome position: 3.11

GC content: 62.05

Gene sequence:

>909_bases
ATGCTGAAGAAACTCGCACTCGCCGTCTCGCTCTCCGCCTTCGCGGTGGGTGCGGCTCACGCCGCGGATGTCGTCGTCTC
GTCGAAGATCGACACGGAAGGCACGCTGCTCGGCAACGTCATTGCGCTTGCGCTCGAAGCCAACGGCATCAAGACGCAGG
ACCGTATCGCACTCGGCGCCACGCCGGTCGTGCGCAAGGCGATCACCGCAGGCGAAATCGACATCTATCCGGAATATACC
GGCAATGCCGGCTTCTTCTTCAACAAGGCCGATGATGCCGCCTGGAAGAACATCGACCAGGGTTACGAGCTGGCGAAGAA
GCTCGATTACGACGCCAACAAGATCGTCTGGCTGACGCCGTCGCCGGCCAATAACACCTGGGCGCTCGCCGTGCGCAACG
ACGTCGCTGAGCCGAACAAGCTGAAGAGCCTCACAGACTTCGGCAAATGGATTGCCGGCGGCGGTGCCGCCAAGCTTGCG
GCGTCTTCCGAATTCGTCAATTCGGCCGGCGCGCTTCCCGCCTTCCAGACCACCTACGGTTTCCAGCTGAAGCCCGACCA
GATGGTGGTGCTCTCCGGCGGCGACACGGCGGCGACGATCAAGGCGGCCGCCGACCAGACGAACGGCGTCAACACCGCCA
TGGTCTACGGCACGGATGGTGCGATCGAAGCGGCCGAGCTGACCGTTCTCGAAGACGACAAGAACGTGCAGCAGGTCTAT
GCGCCGACGCCGATCATCCGCGAAGAGGTGCTGAAGGCCAATCCGAAGATCGAGGAAGTGCTTTCGCCGATCTTCAAGAG
CCTGACCGCCGACGAACTGCGCAAGCTCAACGCCAAGATCCAGGTCGACGGCGAGCCGGCAAAGTCCGTCGCCGAAGCCT
ATCTCAAGGAAAAAGGCTTCCTGAAGTAG

Upstream 100 bases:

>100_bases
GGCCGGCGAACTTCTGTGCGCAAAGCTCCCGCTCGGGGTTTGCGCACCTGCATAATGCAGCAATTCAAAGTGCTAACGGT
GTCAACCAAGGGGATATTCC

Downstream 100 bases:

>100_bases
TCATCGCTCGCTCCGCCCGGTTGCGGGCGGAGCCTCCCTTTGCTGATAGGGTTGGCCGGACGGGACTGGTCAGACAGGGT
TGATTTGATGGAAGAAACCT

Product: substrate-binding region of ABC-type glycine betaine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLKKLALAVSLSAFAVGAAHAADVVVSSKIDTEGTLLGNVIALALEANGIKTQDRIALGATPVVRKAITAGEIDIYPEYT
GNAGFFFNKADDAAWKNIDQGYELAKKLDYDANKIVWLTPSPANNTWALAVRNDVAEPNKLKSLTDFGKWIAGGGAAKLA
ASSEFVNSAGALPAFQTTYGFQLKPDQMVVLSGGDTAATIKAAADQTNGVNTAMVYGTDGAIEAAELTVLEDDKNVQQVY
APTPIIREEVLKANPKIEEVLSPIFKSLTADELRKLNAKIQVDGEPAKSVAEAYLKEKGFLK

Sequences:

>Translated_302_residues
MLKKLALAVSLSAFAVGAAHAADVVVSSKIDTEGTLLGNVIALALEANGIKTQDRIALGATPVVRKAITAGEIDIYPEYT
GNAGFFFNKADDAAWKNIDQGYELAKKLDYDANKIVWLTPSPANNTWALAVRNDVAEPNKLKSLTDFGKWIAGGGAAKLA
ASSEFVNSAGALPAFQTTYGFQLKPDQMVVLSGGDTAATIKAAADQTNGVNTAMVYGTDGAIEAAELTVLEDDKNVQQVY
APTPIIREEVLKANPKIEEVLSPIFKSLTADELRKLNAKIQVDGEPAKSVAEAYLKEKGFLK
>Mature_302_residues
MLKKLALAVSLSAFAVGAAHAADVVVSSKIDTEGTLLGNVIALALEANGIKTQDRIALGATPVVRKAITAGEIDIYPEYT
GNAGFFFNKADDAAWKNIDQGYELAKKLDYDANKIVWLTPSPANNTWALAVRNDVAEPNKLKSLTDFGKWIAGGGAAKLA
ASSEFVNSAGALPAFQTTYGFQLKPDQMVVLSGGDTAATIKAAADQTNGVNTAMVYGTDGAIEAAELTVLEDDKNVQQVY
APTPIIREEVLKANPKIEEVLSPIFKSLTADELRKLNAKIQVDGEPAKSVAEAYLKEKGFLK

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=294, Percent_Identity=57.1428571428571, Blast_Score=342, Evalue=2e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32003; Mature: 32003

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLALAVSLSAFAVGAAHAADVVVSSKIDTEGTLLGNVIALALEANGIKTQDRIALGA
CCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHEEEEEEECCCCCCCCCEEECC
TPVVRKAITAGEIDIYPEYTGNAGFFFNKADDAAWKNIDQGYELAKKLDYDANKIVWLTP
CHHHHHHHCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECC
SPANNTWALAVRNDVAEPNKLKSLTDFGKWIAGGGAAKLAASSEFVNSAGALPAFQTTYG
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCC
FQLKPDQMVVLSGGDTAATIKAAADQTNGVNTAMVYGTDGAIEAAELTVLEDDKNVQQVY
CEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCEEE
APTPIIREEVLKANPKIEEVLSPIFKSLTADELRKLNAKIQVDGEPAKSVAEAYLKEKGF
CCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCEEEECCCHHHHHHHHHHHHCCC
LK
CC
>Mature Secondary Structure
MLKKLALAVSLSAFAVGAAHAADVVVSSKIDTEGTLLGNVIALALEANGIKTQDRIALGA
CCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHEEEEEEECCCCCCCCCEEECC
TPVVRKAITAGEIDIYPEYTGNAGFFFNKADDAAWKNIDQGYELAKKLDYDANKIVWLTP
CHHHHHHHCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECC
SPANNTWALAVRNDVAEPNKLKSLTDFGKWIAGGGAAKLAASSEFVNSAGALPAFQTTYG
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCC
FQLKPDQMVVLSGGDTAATIKAAADQTNGVNTAMVYGTDGAIEAAELTVLEDDKNVQQVY
CEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCEEE
APTPIIREEVLKANPKIEEVLSPIFKSLTADELRKLNAKIQVDGEPAKSVAEAYLKEKGF
CCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCEEEECCCHHHHHHHHHHHHCCC
LK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]