| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is frk [H]
Identifier: 209547746
GI number: 209547746
Start: 126825
End: 127751
Strand: Direct
Name: frk [H]
Synonym: Rleg2_0135
Alternate gene names: 209547746
Gene position: 126825-127751 (Clockwise)
Preceding gene: 209547745
Following gene: 209547750
Centisome position: 2.79
GC content: 64.94
Gene sequence:
>927_bases ATGATTTTGTGCTGCGGCGAAGCCTTGATCGACATGCTGCCGAGGGACACCACCCTGGGCGAAAAGGGCTTTGCGCCCTA TGCCGGCGGCGCGATTTTCAATACCGCCATCGCGCTTGGCCGCCTCGGCATTCCCACCGCCTTCTTCACCGGTATTGCCG ACGACATGATGGGCGAAATCCTGCTTGCGACACTGAAGGCGAGCAATGTCGACTACAGCCCCTGCGCCATCACGCAGCGG CCCTCGACGATCGCTTTCGTCAAACTCGTCAACGGCCAGGCGACCTATGCCTTCTACGACGAGGGCACGGCCGGCCGGAT GATCACCGAGGCCGACCTGCCTGATCTTGGCGATGATTGCGAAGCGCTGCATTTCGGCGCCATCAGCCTGATCCCGAGCC CCTGCGGCGAAACCTATGAAGCGCTGCTCGACCGTGAGGCCGAAAAGCGCGTCATCTCGCTCGACCCCAACATCCGCCCC GGCTTCATCAAGGACAAGCCGGCGCACATGGCCCGCATCAAGCGCATGGCGGCCAAATCCGACATCGTCAAATTCTCCGA CGAGGATCTCGACTGGTTCGGTCTCGCGGGCGACCATGACGCGCTCGCCGCCCATTGGCTCGCCCACGGCGCCAAACTCG TCGTCATCACCAAGGGCGCCGAAGGCGCCTCCGGTTATACCAGGGAGCGTAAGGTGACGGTGCCGAGCGAACGCGTCACG GTCGTCGACACCGTCGGCGCCGGCGACACTTTCGATGCCGGCGTCCTGGCGTCCCTGAAGATGGACGGCCTGCTGACCAA GCCGCAAGTCGCCGCGCTCGACGAACAGGCGGTGCGCAACGCCCTGACGCTCGGCGCCAAAGCCGCCGCCGTCACCGTCT CCCGCGCCGGCGCCAACCCGCCCTGGGCGCATGAGATCGGGCTTTAA
Upstream 100 bases:
>100_bases CGGGACTCAATGGCGGCGTCAGTGAGCTTTCGCTCTAATCGGTTGACAAAAGCTCGCTTAATCGGTTGATGAACATATCA GTGCTGTTGGGAGAAATTCG
Downstream 100 bases:
>100_bases GGCTTAAGCCAGCGTCGGCCCCAGCCGTGAGCTCCCGGCCCCTCATCCGCCTGCCGGCACCTTCTCCCCGCGCGCGGGGC GAAGGGATATGCCGCAGCCT
Product: PfkB domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MILCCGEALIDMLPRDTTLGEKGFAPYAGGAIFNTAIALGRLGIPTAFFTGIADDMMGEILLATLKASNVDYSPCAITQR PSTIAFVKLVNGQATYAFYDEGTAGRMITEADLPDLGDDCEALHFGAISLIPSPCGETYEALLDREAEKRVISLDPNIRP GFIKDKPAHMARIKRMAAKSDIVKFSDEDLDWFGLAGDHDALAAHWLAHGAKLVVITKGAEGASGYTRERKVTVPSERVT VVDTVGAGDTFDAGVLASLKMDGLLTKPQVAALDEQAVRNALTLGAKAAAVTVSRAGANPPWAHEIGL
Sequences:
>Translated_308_residues MILCCGEALIDMLPRDTTLGEKGFAPYAGGAIFNTAIALGRLGIPTAFFTGIADDMMGEILLATLKASNVDYSPCAITQR PSTIAFVKLVNGQATYAFYDEGTAGRMITEADLPDLGDDCEALHFGAISLIPSPCGETYEALLDREAEKRVISLDPNIRP GFIKDKPAHMARIKRMAAKSDIVKFSDEDLDWFGLAGDHDALAAHWLAHGAKLVVITKGAEGASGYTRERKVTVPSERVT VVDTVGAGDTFDAGVLASLKMDGLLTKPQVAALDEQAVRNALTLGAKAAAVTVSRAGANPPWAHEIGL >Mature_308_residues MILCCGEALIDMLPRDTTLGEKGFAPYAGGAIFNTAIALGRLGIPTAFFTGIADDMMGEILLATLKASNVDYSPCAITQR PSTIAFVKLVNGQATYAFYDEGTAGRMITEADLPDLGDDCEALHFGAISLIPSPCGETYEALLDREAEKRVISLDPNIRP GFIKDKPAHMARIKRMAAKSDIVKFSDEDLDWFGLAGDHDALAAHWLAHGAKLVVITKGAEGASGYTRERKVTVPSERVT VVDTVGAGDTFDAGVLASLKMDGLLTKPQVAALDEQAVRNALTLGAKAAAVTVSRAGANPPWAHEIGL
Specific function: Ribose metabolism; first step. [C]
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1790193, Length=285, Percent_Identity=27.3684210526316, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32576; Mature: 32576
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILCCGEALIDMLPRDTTLGEKGFAPYAGGAIFNTAIALGRLGIPTAFFTGIADDMMGEI CEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LLATLKASNVDYSPCAITQRPSTIAFVKLVNGQATYAFYDEGTAGRMITEADLPDLGDDC HHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCCC EALHFGAISLIPSPCGETYEALLDREAEKRVISLDPNIRPGFIKDKPAHMARIKRMAAKS CCEECCEEEECCCCCCHHHHHHHCCHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH DIVKFSDEDLDWFGLAGDHDALAAHWLAHGAKLVVITKGAEGASGYTRERKVTVPSERVT HHEEECCCCCCEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEECCCCCEE VVDTVGAGDTFDAGVLASLKMDGLLTKPQVAALDEQAVRNALTLGAKAAAVTVSRAGANP EEEECCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC PWAHEIGL CCHHCCCC >Mature Secondary Structure MILCCGEALIDMLPRDTTLGEKGFAPYAGGAIFNTAIALGRLGIPTAFFTGIADDMMGEI CEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LLATLKASNVDYSPCAITQRPSTIAFVKLVNGQATYAFYDEGTAGRMITEADLPDLGDDC HHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCCC EALHFGAISLIPSPCGETYEALLDREAEKRVISLDPNIRPGFIKDKPAHMARIKRMAAKS CCEECCEEEECCCCCCHHHHHHHCCHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH DIVKFSDEDLDWFGLAGDHDALAAHWLAHGAKLVVITKGAEGASGYTRERKVTVPSERVT HHEEECCCCCCEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEECCCCCEE VVDTVGAGDTFDAGVLASLKMDGLLTKPQVAALDEQAVRNALTLGAKAAAVTVSRAGANP EEEECCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC PWAHEIGL CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8932706 [H]