| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is pyrE [H]
Identifier: 209547745
GI number: 209547745
Start: 126073
End: 126762
Strand: Direct
Name: pyrE [H]
Synonym: Rleg2_0134
Alternate gene names: 209547745
Gene position: 126073-126762 (Clockwise)
Preceding gene: 209547744
Following gene: 209547746
Centisome position: 2.78
GC content: 62.03
Gene sequence:
>690_bases ATGATCCAGACGACATTTCCCGACCGCGCCGTCATGGCCGAACTGGTGGCCAAGATGCTCTGGGAGATCAAGGCGGTGCA TTTCAATGCCGCCCAGCCTTATAAACTTGCCTCCGGCATGGCGAGCCCGGTCTATATCGATTGCCGCAAGCTGCTTTCCT TCCCGCGCATCCGCTCGACAGTGATGGATTTCGCCGCCAGCACCCTGTTGCGCGATGCCGGCTTCGAGCAGTTCGATTGC ATCGCCGGCGGTGAGACCGCCGGCATCCCCTTCGCCGCGCTGCTTGCCGATCGCCTCGGCCTGCCGATGATCTATGTCCG CAAGCAGCCGAAGGGCCATGGCCGCAATGCCCAGATCGAAGGCAATATGCCGGAAGGGTCGCGCGTGCTGGTCATCGAGG ACCTGACGACGGCCGGAACCAGCATGTTCAAGTTCATCGATGCCGTGCGCGCTGCCGGCGGCATCGTCGATCACGGCATC GCGCTGTTCTTCTACGACATCTTCGGCCAGCAGCGCTTTACCGACGGCAAGGTGAGACTGCATCACATCGCCACCTGGCG CAATATGCTGGCGGTCGCCAAGGCGCAGAAGCTGTTCGACGACAAGACGCTTGAGGAGGTCGAGGCTTTCCTCGATGCGC CGCTCGCCTGGTCGGGACTCAATGGCGGCGTCAGTGAGCTTTCGCTCTAA
Upstream 100 bases:
>100_bases CTCGATATCGGCCGTCTGTTGCTGGAATAGCCGCGCCTGCGTCTGGAAACGATGGGCTCTTGCTGCTATTGCCGGAGACA CAAAGCTGAAGGAGAGCCGC
Downstream 100 bases:
>100_bases TCGGTTGACAAAAGCTCGCTTAATCGGTTGATGAACATATCAGTGCTGTTGGGAGAAATTCGATGATTTTGTGCTGCGGC GAAGCCTTGATCGACATGCT
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MIQTTFPDRAVMAELVAKMLWEIKAVHFNAAQPYKLASGMASPVYIDCRKLLSFPRIRSTVMDFAASTLLRDAGFEQFDC IAGGETAGIPFAALLADRLGLPMIYVRKQPKGHGRNAQIEGNMPEGSRVLVIEDLTTAGTSMFKFIDAVRAAGGIVDHGI ALFFYDIFGQQRFTDGKVRLHHIATWRNMLAVAKAQKLFDDKTLEEVEAFLDAPLAWSGLNGGVSELSL
Sequences:
>Translated_229_residues MIQTTFPDRAVMAELVAKMLWEIKAVHFNAAQPYKLASGMASPVYIDCRKLLSFPRIRSTVMDFAASTLLRDAGFEQFDC IAGGETAGIPFAALLADRLGLPMIYVRKQPKGHGRNAQIEGNMPEGSRVLVIEDLTTAGTSMFKFIDAVRAAGGIVDHGI ALFFYDIFGQQRFTDGKVRLHHIATWRNMLAVAKAQKLFDDKTLEEVEAFLDAPLAWSGLNGGVSELSL >Mature_229_residues MIQTTFPDRAVMAELVAKMLWEIKAVHFNAAQPYKLASGMASPVYIDCRKLLSFPRIRSTVMDFAASTLLRDAGFEQFDC IAGGETAGIPFAALLADRLGLPMIYVRKQPKGHGRNAQIEGNMPEGSRVLVIEDLTTAGTSMFKFIDAVRAAGGIVDHGI ALFFYDIFGQQRFTDGKVRLHHIATWRNMLAVAKAQKLFDDKTLEEVEAFLDAPLAWSGLNGGVSELSL
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=203, Percent_Identity=31.0344827586207, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17508631, Length=132, Percent_Identity=34.8484848484849, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17554964, Length=159, Percent_Identity=25.1572327044025, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI17933654, Length=200, Percent_Identity=26, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 25154; Mature: 25154
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTTFPDRAVMAELVAKMLWEIKAVHFNAAQPYKLASGMASPVYIDCRKLLSFPRIRST CCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCCCCHHHHHHHHHCCHHHHHH VMDFAASTLLRDAGFEQFDCIAGGETAGIPFAALLADRLGLPMIYVRKQPKGHGRNAQIE HHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEE GNMPEGSRVLVIEDLTTAGTSMFKFIDAVRAAGGIVDHGIALFFYDIFGQQRFTDGKVRL CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEE HHIATWRNMLAVAKAQKLFDDKTLEEVEAFLDAPLAWSGLNGGVSELSL HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCCCCHHHCCC >Mature Secondary Structure MIQTTFPDRAVMAELVAKMLWEIKAVHFNAAQPYKLASGMASPVYIDCRKLLSFPRIRST CCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCCCCHHHHHHHHHCCHHHHHH VMDFAASTLLRDAGFEQFDCIAGGETAGIPFAALLADRLGLPMIYVRKQPKGHGRNAQIE HHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEE GNMPEGSRVLVIEDLTTAGTSMFKFIDAVRAAGGIVDHGIALFFYDIFGQQRFTDGKVRL CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEE HHIATWRNMLAVAKAQKLFDDKTLEEVEAFLDAPLAWSGLNGGVSELSL HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA