| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209547743
Identifier: 209547743
GI number: 209547743
Start: 124766
End: 125248
Strand: Reverse
Name: 209547743
Synonym: Rleg2_0132
Alternate gene names: NA
Gene position: 125248-124766 (Counterclockwise)
Preceding gene: 209547747
Following gene: 209547735
Centisome position: 2.76
GC content: 63.35
Gene sequence:
>483_bases ATGCAGTTCGTCCTCATCCTCTCGCTCGTCGCCGCAGCCATCGGCAGCGGCCTCGTTGCCGGCATCTTCTTCGCCTTCTC GACCTTCATCATGACCGCCTTCTCGCGCATCCCGGCGGAGCAGGGCATTGCGGCGATGAACTCGATCAACGTGACGATCG TCCGCTCGCCGTTCATGGCGCTCTTCGTGCCGACGGCAATCCTCTGCCTCGTCATCGCGGCGCTGGCGCTGATGAACTGG CGCGGCGGCGCATCCGCGCTGATGCTGGCGGGTGCGGCCCTCTATGTCTTCGCCTCCTTCCTCTCGACCATCATCTTCAA CGTGCCGATGAACGATGCGCTGGAAAAGGTAACCGTCGGCGGGCCGGAAGCGGCCGCACTCTGGGCGACCTATCTGAAGG ACTGGACATGGTGGAACCATGTGCGGACGGTGGCCTCGCTACTCGCCTCGGTCGCCTTTGTCAGGACGCTGATGATGGTT TGA
Upstream 100 bases:
>100_bases CATGCCTGCTCCTCATGGTTGACAATGAAAATAAGAGAGTTTATCTCATTTTGCAAATAAGAGAGTTTCTCTGATTTTGG CCCTTGGAAGGAGCTTCGAC
Downstream 100 bases:
>100_bases GAAAGCGGCGCGGTAGCCACGCGGGCTCACCACCCTTACCAAGTCAGTTTAGGCCGTGACTGACATTGGCTGGTTTCACT AGCGGATGGCGCCTCTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane Protein-Like Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MQFVLILSLVAAAIGSGLVAGIFFAFSTFIMTAFSRIPAEQGIAAMNSINVTIVRSPFMALFVPTAILCLVIAALALMNW RGGASALMLAGAALYVFASFLSTIIFNVPMNDALEKVTVGGPEAAALWATYLKDWTWWNHVRTVASLLASVAFVRTLMMV
Sequences:
>Translated_160_residues MQFVLILSLVAAAIGSGLVAGIFFAFSTFIMTAFSRIPAEQGIAAMNSINVTIVRSPFMALFVPTAILCLVIAALALMNW RGGASALMLAGAALYVFASFLSTIIFNVPMNDALEKVTVGGPEAAALWATYLKDWTWWNHVRTVASLLASVAFVRTLMMV >Mature_160_residues MQFVLILSLVAAAIGSGLVAGIFFAFSTFIMTAFSRIPAEQGIAAMNSINVTIVRSPFMALFVPTAILCLVIAALALMNW RGGASALMLAGAALYVFASFLSTIIFNVPMNDALEKVTVGGPEAAALWATYLKDWTWWNHVRTVASLLASVAFVRTLMMV
Specific function: Unknown
COG id: COG5500
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17111; Mature: 17111
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFVLILSLVAAAIGSGLVAGIFFAFSTFIMTAFSRIPAEQGIAAMNSINVTIVRSPFMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEHHHHHH LFVPTAILCLVIAALALMNWRGGASALMLAGAALYVFASFLSTIIFNVPMNDALEKVTVG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC GPEAAALWATYLKDWTWWNHVRTVASLLASVAFVRTLMMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MQFVLILSLVAAAIGSGLVAGIFFAFSTFIMTAFSRIPAEQGIAAMNSINVTIVRSPFMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEHHHHHH LFVPTAILCLVIAALALMNWRGGASALMLAGAALYVFASFLSTIIFNVPMNDALEKVTVG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC GPEAAALWATYLKDWTWWNHVRTVASLLASVAFVRTLMMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA