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The map label for this gene is rbsC [H]

Identifier: 209547737

GI number: 209547737

Start: 118583

End: 119647

Strand: Direct

Name: rbsC [H]

Synonym: Rleg2_0126

Alternate gene names: 209547737

Gene position: 118583-119647 (Clockwise)

Preceding gene: 209547736

Following gene: 209547738

Centisome position: 2.61

GC content: 61.69

Gene sequence:

>1065_bases
ATGACCGGAACTCAGGAATTCGAACGTGTCCTCGACGGCAGCGACAAGAGCGTCGCCTCCTTCGAGCACCAGGATGTCTC
GCTGATCAAGCGCGCCCAGCATTTTCTGCACTCGACGCCGGCCGCCGTGCCGCTGATCGTGCTGGTGCTGGCGATCATCA
TCTTCGGGGCAACGATCGGCGGACGGTTCTTCTCGTCCTATACGCTGACGCTGATCCTGCAGCAGATCGCCATTGTCGGC
ATTCTCGGCGCCGCCCAGACGCTGGTCATCCTGACCGCCGGTATCGATCTTTCGATCGGCGTCATCATGGTGATCTCGGC
CGTCATCATGGGTAATGTCGCCATCACCTACGGCATACCGACGCCGATCGCCGTTATCGGCGGCCTCCTCGTCGGCGGCC
TTTGCGGCTTGCTGAACGGCTTCCTCGTCGCCTACATGAAACTGCCGCCCTTCATCGTCACACTCGGCACCTGGAATATC
GTCATGGCGACGAATTTCATCTATTCCGCCAACGAGACGATCCGCGACACCGATGTCGACGAACAGGCGCCGCTGCTGCA
TCTGTTCGCCATGAGTTTCAAGGCAGGCACCGCCGTGCTCACCCTCGGCGTCATCGCCATGGTGCTGCTCGTCCTGGTGC
TCTGGTATGTGCTCAATCACACCGCCTGGGGCCGGCATGTCTATGCGGTCGGCGACGATCCTGAAGCCGCCAAGCTCTCC
GGCATCCAGACCAAGAAGGTGCTGCTCACCGTCTACACCATCTCGGGCGTCATCGCCGCCTTCGCCGCCTGGGTTTCGAT
CGGCCGCAACGGCTCGATCTCGCCCTCCTCGGCGGTCACTGATTATAACCTGCAGGCGATCACCGCGACGGTGATCGGCG
GCATCTCGCTCTTCGGCGGCCGCGGTTCCATTCTCGGCACGCTGTTCGGCGCGATGATCGTCGGCGTCGTGTCGATGGGC
CTCAATATGCTCGGCGCCGACCCGCAATGGAAAGTGCTTTTGACCGGCGTGCTGATCATTGCCGCCGTCGCCATCGACCA
GTGGATCAGAAAGGTTTCGGTGTAA

Upstream 100 bases:

>100_bases
GACGATGTACCGTCGCCCCACGAACCGGCTCAGAATAGACCGGAAGGATATCGGTGACGGCCCCCGTGCGAGTTCGGCGC
ACGGATGCGGAGGAGGAACC

Downstream 100 bases:

>100_bases
TCATGGCTCGCGAACCCCTTCTCACCGCCCCCCTTCTCACTGCCCGGGGTCTCGTCAAGCGCTACGGCCGCGTGACCGCG
CTCGACAATGCCGATTTCGA

Product: Monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MTGTQEFERVLDGSDKSVASFEHQDVSLIKRAQHFLHSTPAAVPLIVLVLAIIIFGATIGGRFFSSYTLTLILQQIAIVG
ILGAAQTLVILTAGIDLSIGVIMVISAVIMGNVAITYGIPTPIAVIGGLLVGGLCGLLNGFLVAYMKLPPFIVTLGTWNI
VMATNFIYSANETIRDTDVDEQAPLLHLFAMSFKAGTAVLTLGVIAMVLLVLVLWYVLNHTAWGRHVYAVGDDPEAAKLS
GIQTKKVLLTVYTISGVIAAFAAWVSIGRNGSISPSSAVTDYNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMG
LNMLGADPQWKVLLTGVLIIAAVAIDQWIRKVSV

Sequences:

>Translated_354_residues
MTGTQEFERVLDGSDKSVASFEHQDVSLIKRAQHFLHSTPAAVPLIVLVLAIIIFGATIGGRFFSSYTLTLILQQIAIVG
ILGAAQTLVILTAGIDLSIGVIMVISAVIMGNVAITYGIPTPIAVIGGLLVGGLCGLLNGFLVAYMKLPPFIVTLGTWNI
VMATNFIYSANETIRDTDVDEQAPLLHLFAMSFKAGTAVLTLGVIAMVLLVLVLWYVLNHTAWGRHVYAVGDDPEAAKLS
GIQTKKVLLTVYTISGVIAAFAAWVSIGRNGSISPSSAVTDYNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMG
LNMLGADPQWKVLLTGVLIIAAVAIDQWIRKVSV
>Mature_353_residues
TGTQEFERVLDGSDKSVASFEHQDVSLIKRAQHFLHSTPAAVPLIVLVLAIIIFGATIGGRFFSSYTLTLILQQIAIVGI
LGAAQTLVILTAGIDLSIGVIMVISAVIMGNVAITYGIPTPIAVIGGLLVGGLCGLLNGFLVAYMKLPPFIVTLGTWNIV
MATNFIYSANETIRDTDVDEQAPLLHLFAMSFKAGTAVLTLGVIAMVLLVLVLWYVLNHTAWGRHVYAVGDDPEAAKLSG
IQTKKVLLTVYTISGVIAAFAAWVSIGRNGSISPSSAVTDYNLQAITATVIGGISLFGGRGSILGTLFGAMIVGVVSMGL
NMLGADPQWKVLLTGVLIIAAVAIDQWIRKVSV

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=317, Percent_Identity=33.7539432176656, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1790524, Length=306, Percent_Identity=35.2941176470588, Blast_Score=141, Evalue=7e-35,
Organism=Escherichia coli, GI1788896, Length=301, Percent_Identity=31.2292358803987, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1787794, Length=317, Percent_Identity=31.8611987381703, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788471, Length=277, Percent_Identity=33.2129963898917, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI87082395, Length=292, Percent_Identity=29.4520547945205, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI145693214, Length=277, Percent_Identity=32.4909747292419, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI145693152, Length=213, Percent_Identity=29.5774647887324, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789992, Length=138, Percent_Identity=36.9565217391304, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1787793, Length=303, Percent_Identity=30.03300330033, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37236; Mature: 37104

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTQEFERVLDGSDKSVASFEHQDVSLIKRAQHFLHSTPAAVPLIVLVLAIIIFGATIG
CCCHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GRFFSSYTLTLILQQIAIVGILGAAQTLVILTAGIDLSIGVIMVISAVIMGNVAITYGIP
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEEECCCHHHHHHHHHHHHHHCCEEEEECCC
TPIAVIGGLLVGGLCGLLNGFLVAYMKLPPFIVTLGTWNIVMATNFIYSANETIRDTDVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEHHHEEEECCCCCCCCCCC
EQAPLLHLFAMSFKAGTAVLTLGVIAMVLLVLVLWYVLNHTAWGRHVYAVGDDPEAAKLS
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHC
GIQTKKVLLTVYTISGVIAAFAAWVSIGRNGSISPSSAVTDYNLQAITATVIGGISLFGG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECC
RGSILGTLFGAMIVGVVSMGLNMLGADPQWKVLLTGVLIIAAVAIDQWIRKVSV
CCHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGTQEFERVLDGSDKSVASFEHQDVSLIKRAQHFLHSTPAAVPLIVLVLAIIIFGATIG
CCHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GRFFSSYTLTLILQQIAIVGILGAAQTLVILTAGIDLSIGVIMVISAVIMGNVAITYGIP
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEEECCCHHHHHHHHHHHHHHCCEEEEECCC
TPIAVIGGLLVGGLCGLLNGFLVAYMKLPPFIVTLGTWNIVMATNFIYSANETIRDTDVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEHHHEEEECCCCCCCCCCC
EQAPLLHLFAMSFKAGTAVLTLGVIAMVLLVLVLWYVLNHTAWGRHVYAVGDDPEAAKLS
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHC
GIQTKKVLLTVYTISGVIAAFAAWVSIGRNGSISPSSAVTDYNLQAITATVIGGISLFGG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECC
RGSILGTLFGAMIVGVVSMGLNMLGADPQWKVLLTGVLIIAAVAIDQWIRKVSV
CCHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]