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The map label for this gene is stbB [H]

Identifier: 209547669

GI number: 209547669

Start: 58398

End: 58820

Strand: Direct

Name: stbB [H]

Synonym: Rleg2_0057

Alternate gene names: 209547669

Gene position: 58398-58820 (Clockwise)

Preceding gene: 209547668

Following gene: 209547670

Centisome position: 1.29

GC content: 56.5

Gene sequence:

>423_bases
ATGATCGTTCTCGATACCAATGTGGTTTCCGAGTTCGCCCGGCCATTGCCGAATGAAAATTTAAAGGCCTGGATGTTGCG
GCAGGACGGCTCGAGAATCTGGCTTTGCACCGTCGGCTTGATGGAGCAGATCTACGGAGCCGAAAGAGTTCTCTTGAAAA
CGGGATCGGACCGCTTCTTTCGCGCCATCGAGAATTTGGTAAAAGGCCAGTTTCGCGACCGTATCGCCGGCTGGGATCTG
GAAGCCGCAATGGCAACCGGTCGCTTGCGGGCGAAACGCGAAAGCTTGGGGCGGCCGATTTCGGTCCAGGATGCGATGAT
TGCCGCCATCTGCCTTGCAAACGGCGCCACACTCGCGACCCGCAACACCAGAGATTTCGAGGGGCTTGATCTCAAGCTCG
TAAACCCGTTTGAAGACGGCTGA

Upstream 100 bases:

>100_bases
TCGTAAGCGAGAACGCCGTAGACGATGAATTTGCGGCCATGATGGACGAAATCGAAGTCGCGCGGAAAAAGGATTTCGGC
CGGCCGTTCGAGGATTTCGA

Downstream 100 bases:

>100_bases
TCCTCAATTGGCGAGATAGAATGTCGCTTAGCATCATTTTCATGGGAACCCCCGAGTTCTCGGTTCCGACCCTGCGCCTG
CTCGTCGATGCCGGGCACAG

Product: PilT protein domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIVLDTNVVSEFARPLPNENLKAWMLRQDGSRIWLCTVGLMEQIYGAERVLLKTGSDRFFRAIENLVKGQFRDRIAGWDL
EAAMATGRLRAKRESLGRPISVQDAMIAAICLANGATLATRNTRDFEGLDLKLVNPFEDG

Sequences:

>Translated_140_residues
MIVLDTNVVSEFARPLPNENLKAWMLRQDGSRIWLCTVGLMEQIYGAERVLLKTGSDRFFRAIENLVKGQFRDRIAGWDL
EAAMATGRLRAKRESLGRPISVQDAMIAAICLANGATLATRNTRDFEGLDLKLVNPFEDG
>Mature_140_residues
MIVLDTNVVSEFARPLPNENLKAWMLRQDGSRIWLCTVGLMEQIYGAERVLLKTGSDRFFRAIENLVKGQFRDRIAGWDL
EAAMATGRLRAKRESLGRPISVQDAMIAAICLANGATLATRNTRDFEGLDLKLVNPFEDG

Specific function: Involved in plasmid stability [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15669; Mature: 15669

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLDTNVVSEFARPLPNENLKAWMLRQDGSRIWLCTVGLMEQIYGAERVLLKTGSDRFF
CEEECHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHCCCEEEEECCCHHHH
RAIENLVKGQFRDRIAGWDLEAAMATGRLRAKRESLGRPISVQDAMIAAICLANGATLAT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEE
RNTRDFEGLDLKLVNPFEDG
CCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MIVLDTNVVSEFARPLPNENLKAWMLRQDGSRIWLCTVGLMEQIYGAERVLLKTGSDRFF
CEEECHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHCCCEEEEECCCHHHH
RAIENLVKGQFRDRIAGWDLEAAMATGRLRAKRESLGRPISVQDAMIAAICLANGATLAT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEE
RNTRDFEGLDLKLVNPFEDG
CCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365; 12928499 [H]