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The map label for this gene is yebA [H]

Identifier: 209406224

GI number: 209406224

Start: 1572034

End: 1572960

Strand: Direct

Name: yebA [H]

Synonym: HPSH_08065

Alternate gene names: 209406224

Gene position: 1572034-1572960 (Clockwise)

Preceding gene: 188528340

Following gene: 188528341

Centisome position: 97.73

GC content: 39.16

Gene sequence:

>927_bases
ATGCCACAAAACCAACTTGTGATCACCATCATTGATGAATCAGGCTCTAAACAGCTCAAATTTTCTAAAAATTTAAAACG
CAACCTCATCATTTCTGTTGTTATTTTTTTGTTGATCGTGGGGCTTGGCGTGGGTTTTTTAAAATTTTTAATCGCTAAAA
TGGATACGATGACAGCACAAAGGAATGCGGTTTTAAGGGATTTTAGGGATTTGTATCAAAAAAATTACACTTTAACAAAA
GAGATTAAAAACAAGCGAGAAGAGCTCTTTGTTGTGGGGCAAAAGATTCGCACGATAGAATCCTTGATTGAAGTCAAAAG
AGGGGCTAATGGGGGCGTGCATCTTTATGATGAAGTGGATTTAGAAAATTTGAATCTGGCCCAAAAACATTTAGCGCTCA
TGCTCATTCCTAATGGCATGCCCTTGAAAACTTATAGCGCTATCAAACCCACCAAAGAAAGGAACCACCCCATTAAAAAA
ATTAAGGGCGTTGAATCCGGGATTGATTTTATCGCGCCATTAAACACGCCTGTTTATGCGAGCGCTGATGGGATTGTGGA
TTTTGTGAAGACCAATTCTAATGTGGGGTATGGGAACTTGGTGCGCATTGAACATGCGTTTGGTTTTAGCTCCATTTACA
CGCATTTAGATCATGTCAGTGTGCAGCCTAAAAGCTTTATCCAAAAAGGGCAGTTGATTGGCTATAGCGGGAAGAGCGGT
AATAGCGGCGGCGAAAAATTGCATTATGAAGTGCGCTTTTTGGGTAAAATTTTAGACGCGCAAAAATTTCTAGCATGGGA
TTTAGATCATTTTCAAAGCGCTTTAGAAGAAAATAAATTTATTGAATGGAAGAATTTGTTTTGGGTTTTAGAAGACATTG
TCCAGCTCCAAGAGCATGTGGATAAAGACGCGCTCATAAGCCAGTAA

Upstream 100 bases:

>100_bases
CTTTGTTTGAAGATTTGAAAGAAAATGAAAATTATTTGGTGTATGGCTCATTTCTGGTAGCTAACGCTTTTTATAAGCGC
TATCAAAAGAAGAGGGATTG

Downstream 100 bases:

>100_bases
GGATTTTAGTGTTTTTAGACAGGCGTTTGATTGTGATGGTTACGGACTCTAAAGGGAGCCGTTATATTAATGTTCATATA
CTATTTCGTCAAATTGGCTT

Product: tox-R activated gene

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MPQNQLVITIIDESGSKQLKFSKNLKRNLIISVVIFLLIVGLGVGFLKFLIAKMDTMTAQRNAVLRDFRDLYQKNYTLTK
EIKNKREELFVVGQKIRTIESLIEVKRGANGGVHLYDEVDLENLNLAQKHLALMLIPNGMPLKTYSAIKPTKERNHPIKK
IKGVESGIDFIAPLNTPVYASADGIVDFVKTNSNVGYGNLVRIEHAFGFSSIYTHLDHVSVQPKSFIQKGQLIGYSGKSG
NSGGEKLHYEVRFLGKILDAQKFLAWDLDHFQSALEENKFIEWKNLFWVLEDIVQLQEHVDKDALISQ

Sequences:

>Translated_308_residues
MPQNQLVITIIDESGSKQLKFSKNLKRNLIISVVIFLLIVGLGVGFLKFLIAKMDTMTAQRNAVLRDFRDLYQKNYTLTK
EIKNKREELFVVGQKIRTIESLIEVKRGANGGVHLYDEVDLENLNLAQKHLALMLIPNGMPLKTYSAIKPTKERNHPIKK
IKGVESGIDFIAPLNTPVYASADGIVDFVKTNSNVGYGNLVRIEHAFGFSSIYTHLDHVSVQPKSFIQKGQLIGYSGKSG
NSGGEKLHYEVRFLGKILDAQKFLAWDLDHFQSALEENKFIEWKNLFWVLEDIVQLQEHVDKDALISQ
>Mature_307_residues
PQNQLVITIIDESGSKQLKFSKNLKRNLIISVVIFLLIVGLGVGFLKFLIAKMDTMTAQRNAVLRDFRDLYQKNYTLTKE
IKNKREELFVVGQKIRTIESLIEVKRGANGGVHLYDEVDLENLNLAQKHLALMLIPNGMPLKTYSAIKPTKERNHPIKKI
KGVESGIDFIAPLNTPVYASADGIVDFVKTNSNVGYGNLVRIEHAFGFSSIYTHLDHVSVQPKSFIQKGQLIGYSGKSGN
SGGEKLHYEVRFLGKILDAQKFLAWDLDHFQSALEENKFIEWKNLFWVLEDIVQLQEHVDKDALISQ

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=189, Percent_Identity=28.042328042328, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87082174, Length=108, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 34898; Mature: 34767

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQNQLVITIIDESGSKQLKFSKNLKRNLIISVVIFLLIVGLGVGFLKFLIAKMDTMTAQ
CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAVLRDFRDLYQKNYTLTKEIKNKREELFVVGQKIRTIESLIEVKRGANGGVHLYDEVD
HHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
LENLNLAQKHLALMLIPNGMPLKTYSAIKPTKERNHPIKKIKGVESGIDFIAPLNTPVYA
CCCCCHHHHCEEEEECCCCCCCCCHHCCCCCHHCCCCHHHHHHHHHCCCEEECCCCCCEE
SADGIVDFVKTNSNVGYGNLVRIEHAFGFSSIYTHLDHVSVQPKSFIQKGQLIGYSGKSG
CCCCCEEHEECCCCCCCCCEEEEEHHHCHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCC
NSGGEKLHYEVRFLGKILDAQKFLAWDLDHFQSALEENKFIEWKNLFWVLEDIVQLQEHV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
DKDALISQ
CHHHHCCC
>Mature Secondary Structure 
PQNQLVITIIDESGSKQLKFSKNLKRNLIISVVIFLLIVGLGVGFLKFLIAKMDTMTAQ
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAVLRDFRDLYQKNYTLTKEIKNKREELFVVGQKIRTIESLIEVKRGANGGVHLYDEVD
HHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
LENLNLAQKHLALMLIPNGMPLKTYSAIKPTKERNHPIKKIKGVESGIDFIAPLNTPVYA
CCCCCHHHHCEEEEECCCCCCCCCHHCCCCCHHCCCCHHHHHHHHHCCCEEECCCCCCEE
SADGIVDFVKTNSNVGYGNLVRIEHAFGFSSIYTHLDHVSVQPKSFIQKGQLIGYSGKSG
CCCCCEEHEECCCCCCCCCEEEEEHHHCHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCC
NSGGEKLHYEVRFLGKILDAQKFLAWDLDHFQSALEENKFIEWKNLFWVLEDIVQLQEHV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
DKDALISQ
CHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]