Click here to switch to the map view.

The map label for this gene is yggG [H]

Identifier: 209400876

GI number: 209400876

Start: 3926921

End: 3927679

Strand: Direct

Name: yggG [H]

Synonym: ECH74115_4238

Alternate gene names: 209400876

Gene position: 3926921-3927679 (Clockwise)

Preceding gene: 209398012

Following gene: 209398337

Centisome position: 70.48

GC content: 51.65

Gene sequence:

>759_bases
ATGAAAATTCGCGCCTTATTGGTAGCAATGAGCGTGGCAACGGTACTGACCGGTTGCCAGAATATGGACTCCAACGGACT
GCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTACAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTC
AGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATACGCTAAACGTCTGACAACTATTGCCAATGCGCTA
GGCAACAATATCAACGGTCAGCCGGTAAATTACAAAGTGTATATGGCGAAGGATGTGAACGCCTTTGCAATGGCTAACGG
CTGTATCCGTGTCTATAGCGGGCTGATGGATATGATGACGGATAACGAAGTCGAAGCGGTGATCGGTCACGAAATGGGGC
ACGTGGCATTAGGCCATGTGAAAAAAGGAATGCAGGTGGCACTTGGTACAAATGCCGTACGAGTAGCTGCGGCCTCGGCG
GGCGGGATTGTCGGCAGTTTATCTCAATCACAACTCGGTGATCTGGGCGAGAAATTAGTTAATTCGCAATTCTCCCAGCG
CCAGGAAGCAGAAGCCGATGATTATTCTTACGATCTTCTGCGCCAACGCGGCATCAGCCCGGCAGGTCTTGCCACCAGCT
TTGAAAAACTGGCAAAACTGGAAGAAGGTCGCCAAAGCTCAATGTTTGACGACCATCCTGCATCCGCCGAACGCGCCCAG
CATATTCGCGATCGCATGAGCGCGGATGGGATTAAGTAA

Upstream 100 bases:

>100_bases
GCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTCGGTTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGA
CCTTGTGCGGAAGAAAAAAC

Downstream 100 bases:

>100_bases
AGCCTGGTGGTGTCGAACGTAGGTCAGATAAGGCGTTCACGCCGCATCTGACATGAATGGCACATTTGTTACCTTGTGCG
CATTGCCGGATGCGATGCTG

Product: peptidase, M48B family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKATIAPANSEYAKRLTTIANAL
GNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
GGIVGSLSQSQLGDLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQ
HIRDRMSADGIK

Sequences:

>Translated_252_residues
MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKATIAPANSEYAKRLTTIANAL
GNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
GGIVGSLSQSQLGDLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQ
HIRDRMSADGIK
>Mature_252_residues
MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKATIAPANSEYAKRLTTIANAL
GNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
GGIVGSLSQSQLGDLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQ
HIRDRMSADGIK

Specific function: Seems to regulate the expression of speB [H]

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Escherichia coli, GI87082185, Length=252, Percent_Identity=99.6031746031746, Blast_Score=516, Evalue=1e-148,
Organism=Escherichia coli, GI87081800, Length=252, Percent_Identity=56.7460317460317, Blast_Score=296, Evalue=6e-82,
Organism=Escherichia coli, GI1788840, Length=193, Percent_Identity=27.4611398963731, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 26844; Mature: 26844

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKA
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
TIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMT
EECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHC
DNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASAGGIVGSLSQSQLGDLGEKLV
CCHHHHHHHHHHCHHHHHHHHCCCEEEECCCHHEEEECCCCCHHHCCCHHHHHHHHHHHH
NSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQ
HHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHH
HIRDRMSADGIK
HHHHHHHCCCCC
>Mature Secondary Structure
MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKA
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
TIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMT
EECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHC
DNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASAGGIVGSLSQSQLGDLGEKLV
CCHHHHHHHHHHCHHHHHHHHCCCEEEECCCHHEEEECCCCCHHHCCCHHHHHHHHHHHH
NSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQ
HHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHH
HIRDRMSADGIK
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2153656; 9278503; 1310091 [H]