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The map label for this gene is ygjQ [H]

Identifier: 209400696

GI number: 209400696

Start: 4079254

End: 4079946

Strand: Direct

Name: ygjQ [H]

Synonym: ECH74115_4400

Alternate gene names: 209400696

Gene position: 4079254-4079946 (Clockwise)

Preceding gene: 209398601

Following gene: 209396548

Centisome position: 73.21

GC content: 51.66

Gene sequence:

>693_bases
ATGCTGCGCGCATTTGCCCGCCTTCTTCTCCGTATTTGTTTTTCTCGCCGGACTCTAAAGATTGCCTGCTTACTGTTACT
TGTGGCAGGAGCGACCATTTTTATCGCCGATCGCGTAATGGTCAACGCCAGCAAACAGCTGACCTGGAGCGACGTCAACG
TCGTTCCGGCGCGTAACGTGGGCTTATTGCTGGGGGCCAGGCCGGGTAATCGCTACTTTACCCGACGTATTGATACCGCA
GCAGAGTTGTACCACGCCGGAAAAGTGAAATGGCTGCTGGTCAGTGGCGATAACGGACGTAAAAATTACGATGAAGCGTC
AGGCATGCAGCAGGCTTTGATCGCAAAGGGCGTACCGGCAAAAGTGATCTTCTGTGACTATGCCGGATTCTCAACGCTTG
ATTCAGTGGTGCGTGCCAATAAAGTGTTTGGGGAGAACCATATCACCATTATCTCGCAGGAATTTCATAACCAACGCGCC
ATCTGGCTGGCAAAACAATACGGCATCGATGCTATCGGGTTTAACGCACCAGACCTGGAAAAAGGACGCGGAAAGATTGT
CCGTCTGCGAGAGAAACTCGCCAGAGTCAGCGCGGTGATTGACGCGAAAATCTTCAATCGTCAGCCAAAATATCTCGGGC
CGTCGGTCATTATTGGTCCGTTTAGTGAGCATGGTTGTCCGGCGCAGAAATAA

Upstream 100 bases:

>100_bases
TCGCTTGGGCAGGACAAAATCTGAAAATGATGTCAGGCGTTATCTTTTCTTTCTTTAGCGCCTAAAATCGACCTCCCCCC
TTTCGTTAAGGATAACGACC

Downstream 100 bases:

>100_bases
TGCGTATCCGCGCACGTCGAAGATGAAAAAGGCGTGCTACATTGACGACAGAATCCCTTTATGGAGTATCCACGCGTTAT
GATACGTTTCGCCGTGATTG

Product: putative SanA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MLRAFARLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVGLLLGARPGNRYFTRRIDTA
AELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRANKVFGENHITIISQEFHNQRA
IWLAKQYGIDAIGFNAPDLEKGRGKIVRLREKLARVSAVIDAKIFNRQPKYLGPSVIIGPFSEHGCPAQK

Sequences:

>Translated_230_residues
MLRAFARLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVGLLLGARPGNRYFTRRIDTA
AELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRANKVFGENHITIISQEFHNQRA
IWLAKQYGIDAIGFNAPDLEKGRGKIVRLREKLARVSAVIDAKIFNRQPKYLGPSVIIGPFSEHGCPAQK
>Mature_230_residues
MLRAFARLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNVGLLLGARPGNRYFTRRIDTA
AELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRANKVFGENHITIISQEFHNQRA
IWLAKQYGIDAIGFNAPDLEKGRGKIVRLREKLARVSAVIDAKIFNRQPKYLGPSVIIGPFSEHGCPAQK

Specific function: Unknown

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli sanA [H]

Homologues:

Organism=Escherichia coli, GI1789468, Length=230, Percent_Identity=93.4782608695652, Blast_Score=441, Evalue=1e-125,
Organism=Escherichia coli, GI1788466, Length=203, Percent_Identity=40.8866995073892, Blast_Score=137, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 25496; Mature: 25496

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAFARLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNV
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEHHHEECCCCCEEECCCEEECCCCC
GLLLGARPGNRYFTRRIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPA
EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
KVIFCDYAGFSTLDSVVRANKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLE
EEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCEEEEEEHHCCCEEECCCCCCCC
KGRGKIVRLREKLARVSAVIDAKIFNRQPKYLGPSVIIGPFSEHGCPAQK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLRAFARLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQLTWSDVNVVPARNV
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEHHHEECCCCCEEECCCEEECCCCC
GLLLGARPGNRYFTRRIDTAAELYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPA
EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
KVIFCDYAGFSTLDSVVRANKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLE
EEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCEEEEEEHHCCCEEECCCCCCCC
KGRGKIVRLREKLARVSAVIDAKIFNRQPKYLGPSVIIGPFSEHGCPAQK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]