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The map label for this gene is ygjR [H]

Identifier: 209396548

GI number: 209396548

Start: 4080025

End: 4081011

Strand: Direct

Name: ygjR [H]

Synonym: ECH74115_4401

Alternate gene names: 209396548

Gene position: 4080025-4081011 (Clockwise)

Preceding gene: 209400696

Following gene: 209395978

Centisome position: 73.22

GC content: 52.18

Gene sequence:

>987_bases
ATGATACGTTTCGCCGTGATTGGTACGAACTGGATAACTCACCAGTTCGTGGAGGCCGCACATGAAAGCGGTAAATATAA
GTTAACCGCCGTTTATTCCCGCAGCCTTGAACAGGCCCAGCACTTCGCCAATGAGTTTTCTGTCGAGCATCTGTTTACTT
CGCTGGAAGCAATGGCGGAAAGTGACGCTATCGACGCGGTGTATATTGCCAGCCCGAACGCCCTGCATTTTTCCCAGACG
CAACTTTTCCTGAGCCACAAAATTCATGTGATTTGTGAGAAACCACTGGCGTCGAATCTGGCGGAAGTGGATGCAGCCAT
TGCCTGCGCGCGTGAAAATCAGGTGGTGCTGTTTGAGGCATTTAAAACGGCCAGCCTGCCTAACTTTCATCTGTTACGCC
AGGCGCTGCCGAAAGTCGGCAAACTGCGGAAAGTTTTTTTCAACTATTGCCAGTATTCCTCGCGGTATCAACGTTACCTG
GACGGTGAGAATCCCAACACCTTTAATCCGGCATTCTCTAACGGTTCAATTATGGATATCGGCTTTTACTGCCTGGCGTC
GGCGGTAGCGTTATTTGGTGAGCCGAAAAGCGTGCAGGCAACCGCCAGTTTACTGGCAAGTGGTGTAGATGCCCACGGCG
TGGTGGTGATGGATTACGGTGATTTCAGCGTCACCTTGCAGCACTCAAAGGTCAGCGATTCTGTCCTGGCAAGCGAGATT
CAGGGCGAAGCGGGATCGCTGGTGATTGAAAAACTGTCTGAATGCCAGAAAGTGTGCTTCGTGCCGCGTGGCAGCCAGAT
GCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATC
TGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACAGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATT
TTTCCGGCAGATAGCGTAAAACTATAA

Upstream 100 bases:

>100_bases
TGGTTGTCCGGCGCAGAAATAATGCGTATCCGCGCACGTCGAAGATGAAAAAGGCGTGCTACATTGACGACAGAATCCCT
TTATGGAGTATCCACGCGTT

Downstream 100 bases:

>100_bases
TTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGACTGAATGGTCTGTCATACTTTGTTACCTGCAA
AGGGGAGTAACTTCATTGCC

Product: oxidoreductase, NAD binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MIRFAVIGTNWITHQFVEAAHESGKYKLTAVYSRSLEQAQHFANEFSVEHLFTSLEAMAESDAIDAVYIASPNALHFSQT
QLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYL
DGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDSVLASEI
QGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVI
FPADSVKL

Sequences:

>Translated_328_residues
MIRFAVIGTNWITHQFVEAAHESGKYKLTAVYSRSLEQAQHFANEFSVEHLFTSLEAMAESDAIDAVYIASPNALHFSQT
QLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYL
DGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDSVLASEI
QGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVI
FPADSVKL
>Mature_328_residues
MIRFAVIGTNWITHQFVEAAHESGKYKLTAVYSRSLEQAQHFANEFSVEHLFTSLEAMAESDAIDAVYIASPNALHFSQT
QLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYL
DGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDSVLASEI
QGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVI
FPADSVKL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=348, Percent_Identity=25.5747126436782, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI145693182, Length=328, Percent_Identity=98.1707317073171, Blast_Score=667, Evalue=0.0,
Organism=Drosophila melanogaster, GI24581117, Length=345, Percent_Identity=26.0869565217391, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24581115, Length=339, Percent_Identity=23.598820058997, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24584727, Length=261, Percent_Identity=25.6704980842912, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36210; Mature: 36210

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFAVIGTNWITHQFVEAAHESGKYKLTAVYSRSLEQAQHFANEFSVEHLFTSLEAMAE
CEEEEEECCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEA
CCCCCEEEEECCCCEEHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEE
FKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHH
GFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDSVLASEI
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHH
QGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGL
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
AVSRITAKLLTEIRRQTGVIFPADSVKL
HHHHHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MIRFAVIGTNWITHQFVEAAHESGKYKLTAVYSRSLEQAQHFANEFSVEHLFTSLEAMAE
CEEEEEECCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEA
CCCCCEEEEECCCCEEHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEE
FKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHH
GFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDSVLASEI
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHH
QGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGL
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
AVSRITAKLLTEIRRQTGVIFPADSVKL
HHHHHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]