Click here to switch to the map view.

The map label for this gene is ydiE [H]

Identifier: 209400588

GI number: 209400588

Start: 2295594

End: 2295812

Strand: Direct

Name: ydiE [H]

Synonym: ECH74115_2423

Alternate gene names: 209400588

Gene position: 2295594-2295812 (Clockwise)

Preceding gene: 209398312

Following gene: 209398577

Centisome position: 41.2

GC content: 45.21

Gene sequence:

>219_bases
TTGTTATATCAATTATTATTAATTTTTATGCGTTATACGGATAGCAGAAAACTCACGCCTGAAACGGATGCCAATCACAA
GACCGCTTCCCCGCAGCCTATTCGGCGAATTTCCAGCCAGACACTGTTAGGTCCGGATGGCAAACTGATTATCGATCATG
ACGGGCAAGAATATCTGCTCCGTAAAACTCAGGCTGGCAAGCTGCTGTTGACCAAGTAG

Upstream 100 bases:

>100_bases
GTGCCCATTCCTGATGGGATGGGCATTTCTGCGCAACTTGTTGTCTTCTCAACACATTACTGCTTGCTCTGGTCAGCCAT
AATATTGATAATAAGAATCA

Downstream 100 bases:

>100_bases
CCTTTAACTCGAGCAGCTGACTTCCAGCCGTTTACCCCAGTCAGGTGGACGACTGACATAGTCATCATCTCTGTCGCTGA
AAGGATTTCGCAACGCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MLYQLLLIFMRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK

Sequences:

>Translated_72_residues
MLYQLLLIFMRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK
>Mature_72_residues
MLYQLLLIFMRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK

Specific function: Unknown

COG id: COG4256

COG function: function code P; Hemin uptake protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Y.enterocolitica hemP [H]

Homologues:

Organism=Escherichia coli, GI1787998, Length=63, Percent_Identity=100, Blast_Score=129, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016060
- InterPro:   IPR019600 [H]

Pfam domain/function: PF10636 hemP [H]

EC number: NA

Molecular weight: Translated: 8253; Mature: 8253

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQLLLIFMRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLL
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCEEEECCCHHEEE
RKTQAGKLLLTK
ECCCCCEEEECC
>Mature Secondary Structure
MLYQLLLIFMRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLL
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCEEEECCCHHEEE
RKTQAGKLLLTK
ECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]