| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209400044
Identifier: 209400044
GI number: 209400044
Start: 5432455
End: 5433306
Strand: Reverse
Name: 209400044
Synonym: ECH74115_5799
Alternate gene names: NA
Gene position: 5433306-5432455 (Counterclockwise)
Preceding gene: 209395990
Following gene: 209395914
Centisome position: 97.51
GC content: 49.88
Gene sequence:
>852_bases ATGGCTTCCAGTAAATCGCTACAGCAGGCAATTGCCAACATAAAAATCTGGCACAAGGGTGAACAGCGCGCGCCGCATAA ACCATTGTTACTGCTATACGTATTAGCGGGATACCTGAATGGACATCCGCGCCTTTTCGATTATGGCACGGAAATCTACG AACCTCTGCACAGTTTACTGGAACGTTTTGGGCCACAGCGTTCACAGTACCGACCTGATATGCCGTTCTGGCGATTACAA GGCGACGGAATCTGGCAATTACACAATGCCGAGCGTTGCTCAACAGCAGGGAGCAGCCGACAACCGCCAGTGAAGGAACT GAACGAATACCACGTTGCAGGCGGTTTCGATGAACAGCACTACGCCCTGGTAACCGGCAATAAAAAACTCATCAATACTC TGGCGCAACAGATACTCGAAGCGCACTTCACCGAGAGTATTCAGGAAGAAATCGCTGACGAGCTGGGTTTTGATCTCCAG CAAACCCGTAAACAGCGCGACCCGTTATTTCGCAAAAATGTATTACGCGCTTATAACTACCAGTGCGCAATATGTGGCTT TAATATGCGCCACGATGACACCACCGTCGCGCTGGTAGCGGCGCATATAAAATGGAAACAGCACGGCGGCCCTTGTGAAA TCCCCAATGGTCTGGCGCTTTGCGCAATACACCATAAAGCCTTTGATAAAGGATCGATTGGCCTGGATGAAAATATGCGG GTACTGGTCTCGGATGCGGTAAACGGCGGAGGGATCGTTGAGAGATTATTCTGGGATTTTGACGGGAAAACTATTGCGTT GCCGCAGGTGCGTAAAAATTACCCTTATGAGGGGTTTGTGGGTGAGAGATAG
Upstream 100 bases:
>100_bases TCTTTTGATCCCTCAACACAGCAATGGATCTTCACTTGCAGGCTTGAACAGCAGAAAATTTGCGAGCATGATTGCAATTA TTTCACTGCCTGGGATATCA
Downstream 100 bases:
>100_bases ACATTCTGTTTACTAATAATTTATAGCCATTCTCTGCTCCTGCATCAGAGATATGATGCAGGAATATTAAATACCAGCCA CCTATAAATTATGATTTATT
Product: HNH nuclease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPRLFDYGTEIYEPLHSLLERFGPQRSQYRPDMPFWRLQ GDGIWQLHNAERCSTAGSSRQPPVKELNEYHVAGGFDEQHYALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQ QTRKQRDPLFRKNVLRAYNYQCAICGFNMRHDDTTVALVAAHIKWKQHGGPCEIPNGLALCAIHHKAFDKGSIGLDENMR VLVSDAVNGGGIVERLFWDFDGKTIALPQVRKNYPYEGFVGER
Sequences:
>Translated_283_residues MASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPRLFDYGTEIYEPLHSLLERFGPQRSQYRPDMPFWRLQ GDGIWQLHNAERCSTAGSSRQPPVKELNEYHVAGGFDEQHYALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQ QTRKQRDPLFRKNVLRAYNYQCAICGFNMRHDDTTVALVAAHIKWKQHGGPCEIPNGLALCAIHHKAFDKGSIGLDENMR VLVSDAVNGGGIVERLFWDFDGKTIALPQVRKNYPYEGFVGER >Mature_282_residues ASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPRLFDYGTEIYEPLHSLLERFGPQRSQYRPDMPFWRLQG DGIWQLHNAERCSTAGSSRQPPVKELNEYHVAGGFDEQHYALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQQ TRKQRDPLFRKNVLRAYNYQCAICGFNMRHDDTTVALVAAHIKWKQHGGPCEIPNGLALCAIHHKAFDKGSIGLDENMRV LVSDAVNGGGIVERLFWDFDGKTIALPQVRKNYPYEGFVGER
Specific function: Unknown
COG id: COG3440
COG function: function code V; Predicted restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32178; Mature: 32047
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPRLFDYGTEIYEPLHSLL CCCHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH ERFGPQRSQYRPDMPFWRLQGDGIWQLHNAERCSTAGSSRQPPVKELNEYHVAGGFDEQH HHHCCCCCCCCCCCCEEEECCCCEEEECCCHHHHCCCCCCCCCHHHHHCEECCCCCCCCC YALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQQTRKQRDPLFRKNVLRAYNY EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCC QCAICGFNMRHDDTTVALVAAHIKWKQHGGPCEIPNGLALCAIHHKAFDKGSIGLDENMR EEEEEECCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCE VLVSDAVNGGGIVERLFWDFDGKTIALPQVRKNYPYEGFVGER EEEECCCCCCHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCC >Mature Secondary Structure ASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPRLFDYGTEIYEPLHSLL CCHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH ERFGPQRSQYRPDMPFWRLQGDGIWQLHNAERCSTAGSSRQPPVKELNEYHVAGGFDEQH HHHCCCCCCCCCCCCEEEECCCCEEEECCCHHHHCCCCCCCCCHHHHHCEECCCCCCCCC YALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQQTRKQRDPLFRKNVLRAYNY EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCC QCAICGFNMRHDDTTVALVAAHIKWKQHGGPCEIPNGLALCAIHHKAFDKGSIGLDENMR EEEEEECCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCE VLVSDAVNGGGIVERLFWDFDGKTIALPQVRKNYPYEGFVGER EEEECCCCCCHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA