| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209395914
Identifier: 209395914
GI number: 209395914
Start: 5429098
End: 5429871
Strand: Reverse
Name: 209395914
Synonym: ECH74115_5794
Alternate gene names: NA
Gene position: 5429871-5429098 (Counterclockwise)
Preceding gene: 209400044
Following gene: 209399018
Centisome position: 97.45
GC content: 44.32
Gene sequence:
>774_bases ATGTCAAAAACACGGCTTAGTAAGCCCGGTTTTTCAGCCAAGTCTGTGCTGACCATTATGTTAATCGCTGCGTCATCTGC ATCTTATGCAGCAGAAAGCATCGATCAACTGGCGACGCGCATCGGTATGGATCACTTCCGGGAAGCGATCAAAAAGGGTG AACGCAGCGCCTTCAAAACGCTGCCGGCAAAAGGCTATAAAAACGGTCTTACCGGGCTGTTAATCAAAACTAACACTTAC GTTAACCCCGAATACAGCTTTGCTGATTGCGATACGGACACCGTTATTATCTCGGTGCAAGAACACAAAACGCTTCCCGG TTGCCGTATATCTTTAAAGCTAGCGACAAAAGACGCAGATGGCAGTTATCACGACAATGGAATTCGCGTTGAATACGGTA TTGCCATCGTCTCCAAAAAGTTTATCGCTAACAATTCAGCGTGGGCGCAACATGCCATCAGCGGTGATAAAGTGTTGGAA GGCGCTCTCCACCCGGATAAAACGAATAACAATAAAGATCAAATGAATAACAATAAAGATCAAATGTGCATGGGTATGGC TCAATTTACCGCAAACGTAACCGAAGGCCGTAACAGTGGGATGACGAAAAGAGAATATTATCAGCGACTTGATAACATGA ACGGTAAGGCCGACGTCACCCAGCAGATGATAACGCTCTATAAGACTTTTGTTGACTACGTATATGAACATCCAAAGCAA GACGCAAAGATTTCAGGGACGTATATTTATACTAACTGTATGAACAACTTCTAG
Upstream 100 bases:
>100_bases GATGTCCACTAAAGAGCCACGCTCCAATAGTGACATTTTGAATCAATGGTCTATGATGCGATAACTGACACCGCTGGGGT GGATTCTGAGGGATAACAAC
Downstream 100 bases:
>100_bases AAACGTAGGTGCCTGAACATGATAGAACTCAGCTGCCAGCATAGAGTGGAAAGCGGAGGCTTACCATCGTATATTCATCG CGTTATCTTTCCGTAACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSKTRLSKPGFSAKSVLTIMLIAASSASYAAESIDQLATRIGMDHFREAIKKGERSAFKTLPAKGYKNGLTGLLIKTNTY VNPEYSFADCDTDTVIISVQEHKTLPGCRISLKLATKDADGSYHDNGIRVEYGIAIVSKKFIANNSAWAQHAISGDKVLE GALHPDKTNNNKDQMNNNKDQMCMGMAQFTANVTEGRNSGMTKREYYQRLDNMNGKADVTQQMITLYKTFVDYVYEHPKQ DAKISGTYIYTNCMNNF
Sequences:
>Translated_257_residues MSKTRLSKPGFSAKSVLTIMLIAASSASYAAESIDQLATRIGMDHFREAIKKGERSAFKTLPAKGYKNGLTGLLIKTNTY VNPEYSFADCDTDTVIISVQEHKTLPGCRISLKLATKDADGSYHDNGIRVEYGIAIVSKKFIANNSAWAQHAISGDKVLE GALHPDKTNNNKDQMNNNKDQMCMGMAQFTANVTEGRNSGMTKREYYQRLDNMNGKADVTQQMITLYKTFVDYVYEHPKQ DAKISGTYIYTNCMNNF >Mature_256_residues SKTRLSKPGFSAKSVLTIMLIAASSASYAAESIDQLATRIGMDHFREAIKKGERSAFKTLPAKGYKNGLTGLLIKTNTYV NPEYSFADCDTDTVIISVQEHKTLPGCRISLKLATKDADGSYHDNGIRVEYGIAIVSKKFIANNSAWAQHAISGDKVLEG ALHPDKTNNNKDQMNNNKDQMCMGMAQFTANVTEGRNSGMTKREYYQRLDNMNGKADVTQQMITLYKTFVDYVYEHPKQD AKISGTYIYTNCMNNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28606; Mature: 28475
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTRLSKPGFSAKSVLTIMLIAASSASYAAESIDQLATRIGMDHFREAIKKGERSAFKT CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHH LPAKGYKNGLTGLLIKTNTYVNPEYSFADCDTDTVIISVQEHKTLPGCRISLKLATKDAD CCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCC GSYHDNGIRVEYGIAIVSKKFIANNSAWAQHAISGDKVLEGALHPDKTNNNKDQMNNNKD CCCCCCCEEEEEHHEEHHHHHHCCCCHHHHHHCCCCHHHHCCCCCCCCCCCHHHCCCCHH QMCMGMAQFTANVTEGRNSGMTKREYYQRLDNMNGKADVTQQMITLYKTFVDYVYEHPKQ HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DAKISGTYIYTNCMNNF CCEECCEEEEECCCCCC >Mature Secondary Structure SKTRLSKPGFSAKSVLTIMLIAASSASYAAESIDQLATRIGMDHFREAIKKGERSAFKT CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHH LPAKGYKNGLTGLLIKTNTYVNPEYSFADCDTDTVIISVQEHKTLPGCRISLKLATKDAD CCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCC GSYHDNGIRVEYGIAIVSKKFIANNSAWAQHAISGDKVLEGALHPDKTNNNKDQMNNNKD CCCCCCCEEEEEHHEEHHHHHHCCCCHHHHHHCCCCHHHHCCCCCCCCCCCHHHCCCCHH QMCMGMAQFTANVTEGRNSGMTKREYYQRLDNMNGKADVTQQMITLYKTFVDYVYEHPKQ HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DAKISGTYIYTNCMNNF CCEECCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA