Definition Escherichia coli O157:H7 str. EC4115, complete genome.
Accession NC_011353
Length 5,572,075

Click here to switch to the map view.

The map label for this gene is 209399734

Identifier: 209399734

GI number: 209399734

Start: 5553229

End: 5553492

Strand: Reverse

Name: 209399734

Synonym: ECH74115_5900

Alternate gene names: NA

Gene position: 5553492-5553229 (Counterclockwise)

Preceding gene: 209399317

Following gene: 209397872

Centisome position: 99.67

GC content: 41.67

Gene sequence:

>264_bases
ATGATCGATCTGGAAAACCAGGAACGGGAGATTATCAATTTAATGTTCAGCCAGCGTATTTCCTGGCTAGCCGCCGTGCG
TATCAGGCATAAATTATCGCTTGCTGAAGTAAGTAAAATGTTAGGTATCTCGATTAATTCTCTAAAACAGATCGAAAAGA
CGGAACGGCTTAGCTCAAACATCAAAAGCAAAATGGCAGAAATTTATGGTTGTCCACCAGAGTTGCTGATATGCCCTTCC
TGGATGACGGCTGAACATAAATGA

Upstream 100 bases:

>100_bases
GTTGACTTCCCGGACCAGGAAAAAGAGCTACGGGAGTTGTCGACGTGGATAGCGGGGGCGGTAAGGTAACTCGCTGATTA
AAATATCCAAGGAAGGAAAT

Downstream 100 bases:

>100_bases
ATAGATTCGTGAATAGATACTTGAATGGATTTTATTTTCTATCCATATGAAAAATAATAGTAAATCTATAAATCAGTTGC
TATTGATGAATAGATACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MIDLENQEREIINLMFSQRISWLAAVRIRHKLSLAEVSKMLGISINSLKQIEKTERLSSNIKSKMAEIYGCPPELLICPS
WMTAEHK

Sequences:

>Translated_87_residues
MIDLENQEREIINLMFSQRISWLAAVRIRHKLSLAEVSKMLGISINSLKQIEKTERLSSNIKSKMAEIYGCPPELLICPS
WMTAEHK
>Mature_87_residues
MIDLENQEREIINLMFSQRISWLAAVRIRHKLSLAEVSKMLGISINSLKQIEKTERLSSNIKSKMAEIYGCPPELLICPS
WMTAEHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10042; Mature: 10042

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLENQEREIINLMFSQRISWLAAVRIRHKLSLAEVSKMLGISINSLKQIEKTERLSSN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IKSKMAEIYGCPPELLICPSWMTAEHK
HHHHHHHHHCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MIDLENQEREIINLMFSQRISWLAAVRIRHKLSLAEVSKMLGISINSLKQIEKTERLSSN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IKSKMAEIYGCPPELLICPSWMTAEHK
HHHHHHHHHCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA