| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209399271
Identifier: 209399271
GI number: 209399271
Start: 2077748
End: 2080261
Strand: Reverse
Name: 209399271
Synonym: ECH74115_2167
Alternate gene names: NA
Gene position: 2080261-2077748 (Counterclockwise)
Preceding gene: 209395902
Following gene: 209397041
Centisome position: 37.33
GC content: 56.48
Gene sequence:
>2514_bases ATGACTTTCAATGCGTACCTGTCACAACAGCGTAAGGCGTGGGACGTTCTCAGTGATTTCTGCTCGGCGATGCGCTGTAT GCCGGTATGGAACGGGCAGACGCTGACGTTTGTGCAGGACCGTCCGTCAGATGTGGTGTGGCCCTACACCAGCAGTGATG TGGTGGTGGATGATAACGGCGTGGGGTTTCGCTACAGCTTCAGCGCCCTGAAGGACCGCCACACGGCGGTGGAGGTGAAT TACACCGACCCGCAGAACGGCTGGCAGACCTCCACGGAACTGGTGGAAGACCCGGAAGCCATACTGCGCTACGGGCGCAA CCTGCTGAAGATGGATGCGTTCGGCTGTACCAGTCGCGGTCAGGCCCACCGTGCCGGGCTGTGGGTGATAAAGACCGGAC TGCTGGAAACGCAGACGGTGGATTTCACGCTCGGGTCACAGGGGCTGCGTCACACACCCGGTGACATTATTGAAATCTGT GATAACGACTATGCCGGGACCATGACCGGCGGACGTATCCTGTCCATCGATGCCGCCAGCCGCACCCTGACACTGGACCG TGAGGTGACCCTGCCGGAGACCGGTGCCGCCACGGTGAACCTGATTAACGGCAGCGGTAAGCCGGTGAGCGTGGCCATCA CTGCACACCCCGCGCCGGACCGGATACAGGTCAGCACCCTGCCGGATGGCGTGGAGACATACGGTGTGTGGGGGCTCTCC CTGCCGTCACTGCGTCGTCGCCTGTTCCGCTGTGTCTCCATCCGGGAAAACACGGACGGCACCTTTGCCATCACGGCAGT GCAGCACGTACCGGAAAAAGAAGCCATCGTGGATAACGGGGCGCACTTTGACGGCGACCAGAGCGGCACCCTGAACAGCG TCATCCCTCCGGCAGTGCAGCACCTGACGGTGGAGGTGAGTGCAGCTGACAGCCAGTATCTGGCGCAGGCGAAATGGGAC ACGCCGCGGGTGGTGAAGGGCGTGCGCTTCAGTCTGCGCCTGACCAGTGGAAGCGGTCAGGACAGCCGTCTGGTGACCAC CGCCATCACTGCGGATACAGAGCATCGTTTCAGTGGTCTGCCGCTCGGGGAATACACCCTGACAGTCAGGGCAATTAACA GTTATGGCCAGCAGGGGGAACCGGCCATCACCACCTTCCGGATTAACGCGCCAGCAAAACCCGCCACCATTGAACTGACG CCGGGGTATTTTCAGATAACGGCGGTACCGGTGCTGGCGGTGTATGACCCGACGGTGCAGTTTGAGTTCTGGTTTTCGGA AAAACGCATCACGAACACGGCACAGGTGGAAAAATCTGCCCGTTATCTGGGGAGCGGCAGTCAGTGGACTGTCCAGGGAA GCCGGATTAAGCCGGGGACGGATTTCTGGTTTTACGTGCGCAGCGTCAACCTGGTGGGGAAATCTGCGTTTGTGGAAGTC AGCGGGCAGCCCAGCAATGATGGTGAAGGGTATCTGGAATTTTTCCGGGAAAAAATAGGAAAACTGCATCTGGCTCAGGG GCTATGGGAGCTGATAGACAACAGCCAGCTTGCGGATGAGATGGCGGAGATGAAGACCACCATCACGGAAACCCGCAATG AAATCACACAGACGGTCAGTAAAACGCTGGAGAACCAGAGCGCCACTATACAGCAGATACAGCGCGTGCAGAAGGACACA AATGATGACCTGGCTGCGCTGTACATGCTGAAGGTTCAAAAAACGAAAGACGGCATTCCCTATGTGGCCGGGATTGGTGC AGGGATTGAGGATACTGATGGCCAGCCACTGAGCAACATACTGCTGCTGGCTGACCGTATCGCGATGATAAATCCGGAGA GCGGCAACAGCACGCCGTTATTTGTGGCGCAGGGGAATCAGCTGTTCATGAACGACGTGTTCCTGAAGCGACTGTTTGCG GTGAGTATCACCTCGTCCGGCAATCCCCCGACGTTTTCCCTGACGCCGGACGGGCGACTGACGGCGAAAAATGCGGATAT CAGTGGCAGTGTGAATGCGAACTCAGGGACGCTCAACAACGTCACGATTAATGAGAACTGTCAGATTAAGGGGAAACTGT CAGCCAACCAGATTGAAGGCGATATTGTCAAAACGGTCAGCAAGTCTTTCCCCCGCACGAGCACTTATGCCAGTGGCACC ATCACGGTAAGAATCAGTGATGATCAGAAGTTTGACCGGCAGGTCATGATACCGCCAGTGTTATTCCGCGGTGGTAAGCA TGAGAATTTCAACAGTAATAACCAACAGTCATACTGGTATTCAACCTGCCGGTTAAGAGTGACCCGCAATGGTCAGGAGA TTTTTAATCAGTCCACGACGGATGCTCAGGGCGTATTTTCCTCAGTTATAGATATGCCTGCCGGACAGGGGACGCTGACA CTGACATTCACCGTATCTTCATCAGGAGCGAATAACTGGACACCAACAACCAGTATCAGCGATCTGCTGGTTGTGGTGAT GAAAAAATCCACAGCAGGTATCAGTATCAGCTGA
Upstream 100 bases:
>100_bases CCATGACCGGCGGACGTGTCCTGTCCATCGATGCCGCCAGCCGCACGCGCAGTACTGCGACCAGACGGTCCCGGATGGTT TCGGGGGCACAGAGCCGCGG
Downstream 100 bases:
>100_bases ATTTTATAACCCATATACGGGCGCCAGAAATGGCGCCTTTTTTATTGCAGAAAAGCGAGAGGTAATTATGCGTAAACTTT ATGCCGCCATTTTGTCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Hocificity Protein; Fibronectin Type III Domain-Containing Protein; Phage Tail Protein; Phage-Related Protein Tail Component; Hocificity Protein; Bacteriophage Protein; Prophage LambdaSo Hocificity Protein J; Hocificity Protein J Of Prophage; Fibronectin Type III; Hocificity Protein J Prophage; Gifsy-1 Prophage VhsJ; Phage-Related Protein Tail Component-Like; Phage-Related Protein Tail Component-Like Protein; Host-Specificity Protein; Hocificity Protein J Truncation; Tail Fiber V; Type III Fibronectin; Bacteriophage Tail Protein; Hocificity Protein J InteRNAl Deletion; Phage Protein
Number of amino acids: Translated: 837; Mature: 836
Protein sequence:
>837_residues MTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTSSDVVVDDNGVGFRYSFSALKDRHTAVEVN YTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEIC DNDYAGTMTGGRILSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLS LPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGAHFDGDQSGTLNSVIPPAVQHLTVEVSAADSQYLAQAKWD TPRVVKGVRFSLRLTSGSGQDSRLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQGEPAITTFRINAPAKPATIELT PGYFQITAVPVLAVYDPTVQFEFWFSEKRITNTAQVEKSARYLGSGSQWTVQGSRIKPGTDFWFYVRSVNLVGKSAFVEV SGQPSNDGEGYLEFFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEITQTVSKTLENQSATIQQIQRVQKDT NDDLAALYMLKVQKTKDGIPYVAGIGAGIEDTDGQPLSNILLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFA VSITSSGNPPTFSLTPDGRLTAKNADISGSVNANSGTLNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTSTYASGT ITVRISDDQKFDRQVMIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDAQGVFSSVIDMPAGQGTLT LTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS
Sequences:
>Translated_837_residues MTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTSSDVVVDDNGVGFRYSFSALKDRHTAVEVN YTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEIC DNDYAGTMTGGRILSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLS LPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGAHFDGDQSGTLNSVIPPAVQHLTVEVSAADSQYLAQAKWD TPRVVKGVRFSLRLTSGSGQDSRLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQGEPAITTFRINAPAKPATIELT PGYFQITAVPVLAVYDPTVQFEFWFSEKRITNTAQVEKSARYLGSGSQWTVQGSRIKPGTDFWFYVRSVNLVGKSAFVEV SGQPSNDGEGYLEFFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEITQTVSKTLENQSATIQQIQRVQKDT NDDLAALYMLKVQKTKDGIPYVAGIGAGIEDTDGQPLSNILLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFA VSITSSGNPPTFSLTPDGRLTAKNADISGSVNANSGTLNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTSTYASGT ITVRISDDQKFDRQVMIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDAQGVFSSVIDMPAGQGTLT LTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS >Mature_836_residues TFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTSSDVVVDDNGVGFRYSFSALKDRHTAVEVNY TDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICD NDYAGTMTGGRILSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLSL PSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGAHFDGDQSGTLNSVIPPAVQHLTVEVSAADSQYLAQAKWDT PRVVKGVRFSLRLTSGSGQDSRLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQGEPAITTFRINAPAKPATIELTP GYFQITAVPVLAVYDPTVQFEFWFSEKRITNTAQVEKSARYLGSGSQWTVQGSRIKPGTDFWFYVRSVNLVGKSAFVEVS GQPSNDGEGYLEFFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEITQTVSKTLENQSATIQQIQRVQKDTN DDLAALYMLKVQKTKDGIPYVAGIGAGIEDTDGQPLSNILLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFAV SITSSGNPPTFSLTPDGRLTAKNADISGSVNANSGTLNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTSTYASGTI TVRISDDQKFDRQVMIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDAQGVFSSVIDMPAGQGTLTL TFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS
Specific function: Unknown
COG id: COG4733
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91469; Mature: 91337
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTSSDVVVDDNG CEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCEEEEECCCCEEECCCC VGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRG CCEEEEHHHHCCCCEEEEEEECCCCCCCCCHHHHHCCHHHHHHHCCCEEEECCCCCCCCC QAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRILSIDAAS CCCCCCEEEEEECCEEEEEEEEEECCCCCCCCCCHHHEECCCCCCCCCCCCEEEEEECCC RTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLS EEEEECCEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCHHHEEECCC LPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGAHFDGDQSGTLNSVIPPAVQ CHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCHHEECCCCCCCCCCCCCCCCCCCCCCE HLTVEVSAADSQYLAQAKWDTPRVVKGVRFSLRLTSGSGQDSRLVTTAITADTEHRFSGL EEEEEEECCCCHHHHHCCCCCCHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCHHCCCC PLGEYTLTVRAINSYGQQGEPAITTFRINAPAKPATIELTPGYFQITAVPVLAVYDPTVQ CCCCEEEEEEEEHHCCCCCCCEEEEEEECCCCCCCEEEECCCEEEEEEEEEEEEECCCEE FEFWFSEKRITNTAQVEKSARYLGSGSQWTVQGSRIKPGTDFWFYVRSVNLVGKSAFVEV EEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCEECCCCCEEEEEEEEEEECCEEEEEE SGQPSNDGEGYLEFFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEITQTVS CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH KTLENQSATIQQIQRVQKDTNDDLAALYMLKVQKTKDGIPYVAGIGAGIEDTDGQPLSNI HHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHH LLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPTFSLTPDGRL HHHHHHEEEECCCCCCCCEEEEECCCEEEHHHHHHHHEEEEEEECCCCCCEEEECCCCCE TAKNADISGSVNANSGTLNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTSTYASGT EEECCCCCCEEECCCCCEEEEEECCCCEEEECCCCCHHCHHHHHHHHHHCCCCCCCCCCE ITVRISDDQKFDRQVMIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTT EEEEECCCCCCCCEEECCHHEECCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHCCCCC DAQGVFSSVIDMPAGQGTLTLTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHEEEEEEECCCCCCEEC >Mature Secondary Structure TFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTSSDVVVDDNG EEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCEEEEECCCCEEECCCC VGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRG CCEEEEHHHHCCCCEEEEEEECCCCCCCCCHHHHHCCHHHHHHHCCCEEEECCCCCCCCC QAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRILSIDAAS CCCCCCEEEEEECCEEEEEEEEEECCCCCCCCCCHHHEECCCCCCCCCCCCEEEEEECCC RTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLS EEEEECCEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCHHHEEECCC LPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGAHFDGDQSGTLNSVIPPAVQ CHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCHHEECCCCCCCCCCCCCCCCCCCCCCE HLTVEVSAADSQYLAQAKWDTPRVVKGVRFSLRLTSGSGQDSRLVTTAITADTEHRFSGL EEEEEEECCCCHHHHHCCCCCCHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCHHCCCC PLGEYTLTVRAINSYGQQGEPAITTFRINAPAKPATIELTPGYFQITAVPVLAVYDPTVQ CCCCEEEEEEEEHHCCCCCCCEEEEEEECCCCCCCEEEECCCEEEEEEEEEEEEECCCEE FEFWFSEKRITNTAQVEKSARYLGSGSQWTVQGSRIKPGTDFWFYVRSVNLVGKSAFVEV EEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCEECCCCCEEEEEEEEEEECCEEEEEE SGQPSNDGEGYLEFFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEITQTVS CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH KTLENQSATIQQIQRVQKDTNDDLAALYMLKVQKTKDGIPYVAGIGAGIEDTDGQPLSNI HHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHH LLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPTFSLTPDGRL HHHHHHEEEECCCCCCCCEEEEECCCEEEHHHHHHHHEEEEEEECCCCCCEEEECCCCCE TAKNADISGSVNANSGTLNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTSTYASGT EEECCCCCCEEECCCCCEEEEEECCCCEEEECCCCCHHCHHHHHHHHHHCCCCCCCCCCE ITVRISDDQKFDRQVMIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTT EEEEECCCCCCCCEEECCHHEECCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHCCCCC DAQGVFSSVIDMPAGQGTLTLTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHEEEEEEECCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA