| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209395902
Identifier: 209395902
GI number: 209395902
Start: 2080258
End: 2081826
Strand: Reverse
Name: 209395902
Synonym: ECH74115_2168
Alternate gene names: NA
Gene position: 2081826-2080258 (Counterclockwise)
Preceding gene: 209398117
Following gene: 209399271
Centisome position: 37.36
GC content: 59.27
Gene sequence:
>1569_bases ATGGGAAAAGGTGGCGGTAAGGCACACACGCCTCGTGAGGCGAAGGATAATCTCAAATCCACGCAGATGATGAGTGTGAT TGATGCGATTGGTGAGGGACCGATAGAAGGTCCGGTGAAGGGACTGCAGAGTATTCTGGTGAACAAAACCCCACTGACGG ACACGGACGGCAATCCCGTGATACACGGTGTGACCGCGGTCTGGCGTGCCGGGGAGCAGGAGCAGACACCACCGGAAGGC TTTGAGTCCTCCGGAGCTGAAACCGGACTGGGCGTGGAAGTGACGAAGGCAAAACCGGTGACGCGCACCATTACGTCCGC GAACATTGACCGCCTGCGGGTCACCTTCGGGGTGCAGTCACTGTTGGAGACCACCTCAAAGGGCGACCGTAATCACTCTT CTGTCCGACTGCTGATTCAGTTGCAGCGTAACGGTAACTGGGTGACGGAAAAGGATGTCACCATTAACGGCAAGACCACC TCGCAGTTTCTGGCGTCGGTGATTCTGGATAATCTGCCTGAGCGGCCCTTTAACATCCGGATGGTCCGGGAGACAGCGGA CAGCACCTCGGACCAGCTGCAGAATAAGACGCTCTGGTCGTCATACACCGAAATCATCGATGTGAAACAGTGCTACCCGA ACACGGCGATTGTGGGGCTGCAGGTGGATGCGGAGCAGTTTGGCGGTCAGCAGATGACGGTGAACTACCATATCCGCGGT CGCATCATCCAGGTACCGTCAAACTATGACCCGGAAAAACGCACGTACAGCGGCATCTGGGACGGCAGCCTGAAACCGGC ATACAGCAACAACCCTGCCTGGTGCCTGTGGGACATGCTGACCCACCCGCGCTACGGAATGGGAAAACGCCTGGGGGCGG CGGATGTGGACAAGTGGGCGCTGTATGCCATTGCGCAGTACTGCGACCAGACGGTCCCGGATGGTTTCGGGGGCACAGAG CCGCGGATGACTTTCAATGCGTACCTGTCACAACAGCGTAAGGCGTGGGACGTTCTCAGTGATTTCTGCTCGGCGATGCG CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTTGTGCAGGACCGTCCGTCAGATGTGGTGTGGCCCTACACCAGCA GTGATGTGGTGGTGGATGATAACGGCGTGGGGTTTCGCTACAGCTTCAGCGCCCTGAAGGACCGCCACACGGCGGTGGAG GTGAATTACACCGACCCGCAGAACGGCTGGCAGACCTCCACGGAACTGGTGGAAGACCCGGAAGCCATACTGCGCTACGG ACGCAACCTGCTGAAGATGGATGCGTTCGGCTGCACCAGTCGCGGTCAGGCCCACCGTGCCGGGCTGTGGGTGATAAAGA CCGGACTGCTGGAAACGCAGACGGTGGATTTCACGCTCGGGTCACAGGGGCTGCGTCACACACCCGGTGACATTATTGAA ATCTGTGATAACGACTATGCCGGGACCATGACCGGCGGACGTGTCCTGTCCATCGATGCCGCCAGCCGCACGCGCAGTAC TGCGACCAGACGGTCCCGGATGGTTTCGGGGGCACAGAGCCGCGGATGA
Upstream 100 bases:
>100_bases TTTAGCATGGCAGAAATGTGTTTCATGCTTTTCGGGCGAAGGATATCCGACTTCTGTACGGAATGGCAAGTGGCGGTTAA TTTATTCAGGGGAAGGCTGT
Downstream 100 bases:
>100_bases CTTTCAATGCGTACCTGTCACAACAGCGTAAGGCGTGGGACGTTCTCAGTGATTTCTGCTCGGCGATGCGCTGTATGCCG GTATGGAACGGGCAGACGCT
Product: host specificity protein
Products: NA
Alternate protein names: Phage Hocificity Protein; Fibronectin Type III Domain-Containing Protein; Phage-Related Protein Tail Component; Phage Tail Protein; Hocificity Protein; Prophage LambdaSo Hocificity Protein J; Bacteriophage Protein; Hocificity Protein J Of Prophage; Fibronectin Type III; Hocificity Protein J Prophage; Gifsy-1 Prophage VhsJ; Phage-Related Protein Tail Component-Like; Phage-Related Protein Tail Component-Like Protein; Host-Specificity Protein; Hocificity Protein J Truncation; Tail Fiber V; Type III Fibronectin; Bacteriophage Tail Protein; Phage-Like Protein Tail Component-Like Protein; Phage Protein
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MGKGGGKAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEG FESSGAETGLGVEVTKAKPVTRTITSANIDRLRVTFGVQSLLETTSKGDRNHSSVRLLIQLQRNGNWVTEKDVTINGKTT SQFLASVILDNLPERPFNIRMVRETADSTSDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRG RIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIAQYCDQTVPDGFGGTE PRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTSSDVVVDDNGVGFRYSFSALKDRHTAVE VNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIE ICDNDYAGTMTGGRVLSIDAASRTRSTATRRSRMVSGAQSRG
Sequences:
>Translated_522_residues MGKGGGKAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEG FESSGAETGLGVEVTKAKPVTRTITSANIDRLRVTFGVQSLLETTSKGDRNHSSVRLLIQLQRNGNWVTEKDVTINGKTT SQFLASVILDNLPERPFNIRMVRETADSTSDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRG RIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIAQYCDQTVPDGFGGTE PRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTSSDVVVDDNGVGFRYSFSALKDRHTAVE VNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIE ICDNDYAGTMTGGRVLSIDAASRTRSTATRRSRMVSGAQSRG >Mature_521_residues GKGGGKAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEGF ESSGAETGLGVEVTKAKPVTRTITSANIDRLRVTFGVQSLLETTSKGDRNHSSVRLLIQLQRNGNWVTEKDVTINGKTTS QFLASVILDNLPERPFNIRMVRETADSTSDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRGR IIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIAQYCDQTVPDGFGGTEP RMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTSSDVVVDDNGVGFRYSFSALKDRHTAVEV NYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEI CDNDYAGTMTGGRVLSIDAASRTRSTATRRSRMVSGAQSRG
Specific function: Unknown
COG id: COG4733
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57609; Mature: 57478
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKGGGKAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCE IHGVTAVWRAGEQEQTPPEGFESSGAETGLGVEVTKAKPVTRTITSANIDRLRVTFGVQS EEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEHHHHHH LLETTSKGDRNHSSVRLLIQLQRNGNWVTEKDVTINGKTTSQFLASVILDNLPERPFNIR HHHHHCCCCCCCCEEEEEEEEECCCCEEEECCEEECCCHHHHHHHHHHHHHCCCCCCEEE MVRETADSTSDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRG EEECHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCEEEEEEEEEEE RIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWA EEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHH LYAIAQYCDQTVPDGFGGTEPRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFV HHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEECEECCCCEEEEE QDRPSDVVWPYTSSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDP ECCCCCEEECCCCCCEEECCCCCCEEEEHHHHCCCCCEEEEEECCCCCCCCCHHHHHCCH EAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIE HHHHHHCCCEEEECCCCCCCCCCCHHCCEEEEEECCEEEEEEEEEECCCCCCCCCCHHHH ICDNDYAGTMTGGRVLSIDAASRTRSTATRRSRMVSGAQSRG HCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GKGGGKAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCE IHGVTAVWRAGEQEQTPPEGFESSGAETGLGVEVTKAKPVTRTITSANIDRLRVTFGVQS EEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEHHHHHH LLETTSKGDRNHSSVRLLIQLQRNGNWVTEKDVTINGKTTSQFLASVILDNLPERPFNIR HHHHHCCCCCCCCEEEEEEEEECCCCEEEECCEEECCCHHHHHHHHHHHHHCCCCCCEEE MVRETADSTSDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRG EEECHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCEEEEEEEEEEE RIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWA EEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHH LYAIAQYCDQTVPDGFGGTEPRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFV HHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEECEECCCCEEEEE QDRPSDVVWPYTSSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDP ECCCCCEEECCCCCCEEECCCCCCEEEEHHHHCCCCCEEEEEECCCCCCCCCHHHHHCCH EAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIE HHHHHHCCCEEEECCCCCCCCCCCHHCCEEEEEECCEEEEEEEEEECCCCCCCCCCHHHH ICDNDYAGTMTGGRVLSIDAASRTRSTATRRSRMVSGAQSRG HCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA