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The map label for this gene is ylcI

Identifier: 209399036

GI number: 209399036

Start: 1566171

End: 1566305

Strand: Reverse

Name: ylcI

Synonym: ECH74115_1618

Alternate gene names: 209399036

Gene position: 1566305-1566171 (Counterclockwise)

Preceding gene: 209400715

Following gene: 209398335

Centisome position: 28.11

GC content: 40.74

Gene sequence:

>135_bases
ATGATTGAACAAATTAACATCGCTCTTGATCAAAAAGGGTCCGGAAATTTCTCAGCCTGGGTCATTGAAGCCTGCCGTCG
GAGGCTAACGTCAGAAAAGAGAGCATATACATCAATTAAAAGTGATGAAGAATGA

Upstream 100 bases:

>100_bases
AGACAATACAAATCAGCGACACTGAATACGGGGCAACCTCATGTCAACGAAGAACAGAACCCGCAGAACAACAACCCGCA
ACATCCGCTTTCCTAACCAA

Downstream 100 bases:

>100_bases
ACATCCCGCGTTCTTCCCTCCGAACAGGACGATATTGTAAATTCACTTAATTACGAGGGCATTGCAGTAATTGAGTTGCA
GTTTTACCACTTTCCTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MIEQINIALDQKGSGNFSAWVIEACRRRLTSEKRAYTSIKSDEE

Sequences:

>Translated_44_residues
MIEQINIALDQKGSGNFSAWVIEACRRRLTSEKRAYTSIKSDEE
>Mature_44_residues
MIEQINIALDQKGSGNFSAWVIEACRRRLTSEKRAYTSIKSDEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693102, Length=44, Percent_Identity=97.7272727272727, Blast_Score=91, Evalue=2e-20,
Organism=Escherichia coli, GI87081930, Length=37, Percent_Identity=86.4864864864865, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YLCI_ECO57 (Q8X702)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D90832
- PIR:   F85689
- RefSeq:   NP_287366.1
- RefSeq:   NP_309655.1
- EnsemblBacteria:   EBESCT00000024422
- EnsemblBacteria:   EBESCT00000060420
- GeneID:   913254
- GeneID:   959837
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1881
- KEGG:   ecs:ECs1628
- GeneTree:   EBGT00050000011056
- HOGENOM:   HBG671714
- OMA:   RACTSIQ
- ProtClustDB:   CLSK2393183
- BioCyc:   ECOL83334:ECS1628-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5046; Mature: 5046

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQINIALDQKGSGNFSAWVIEACRRRLTSEKRAYTSIKSDEE
CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIEQINIALDQKGSGNFSAWVIEACRRRLTSEKRAYTSIKSDEE
CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796