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The map label for this gene is ybcV [H]

Identifier: 209398335

GI number: 209398335

Start: 1565104

End: 1565514

Strand: Reverse

Name: ybcV [H]

Synonym: ECH74115_1616

Alternate gene names: 209398335

Gene position: 1565514-1565104 (Counterclockwise)

Preceding gene: 209399036

Following gene: 209398869

Centisome position: 28.1

GC content: 32.12

Gene sequence:

>411_bases
ATGGCTCAGGTTGCCATTTTTAAAGAAATATTCGATCAAGTGCGAAAAGATTTAAACTGTGAATTGTTTTATTCTGAACT
AAAACGTCACAATGTCTCACATTATATTTACTATCTAGCCACAGATAATATTCACATTGTGTTAGAAAACGATAACACTG
TGTTAATAAAAGGACTTAAAAAGGTTGTGAATGTTAAATTCTCAAGAAATACGCATCTTATAGAAACGTCCTATGATAGG
TTGAAATCAAGAGAAATCACATTTCAGCAATACAGGGAAAATCTTGCTAAAGCAGGAGTTTTCCGATGGGTTACAAATAT
CCACGAACATAAAAGATATTACTATGCCTTTGATAATTCATTACTATTTACTGAGAGCATTCAGAACACTACACAAATCT
TTCCACGCTAA

Upstream 100 bases:

>100_bases
CATAAATCATCAACAAAACACAAAGAGGTCAGACCAGATTGAAACGATAAAAACGATAATGCAAACTACGCGCCCTCGTA
TCACATGGAAGGTTTTACCA

Downstream 100 bases:

>100_bases
ATCATCACGTCCGGTTTCTTCCGTGTCAGCACCGGGGCGTTGGCATAATGCAATACGTGTACGCGCTAAACCCTGTGTGC
ATCGTTATTAATTATTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDR
LKSREITFQQYRENLAKAGVFRWVTNIHEHKRYYYAFDNSLLFTESIQNTTQIFPR

Sequences:

>Translated_136_residues
MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDR
LKSREITFQQYRENLAKAGVFRWVTNIHEHKRYYYAFDNSLLFTESIQNTTQIFPR
>Mature_135_residues
AQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRL
KSREITFQQYRENLAKAGVFRWVTNIHEHKRYYYAFDNSLLFTESIQNTTQIFPR

Specific function: Unknown

COG id: COG5562

COG function: function code R; Phage envelope protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgX and ydfO [H]

Homologues:

Organism=Escherichia coli, GI87081758, Length=136, Percent_Identity=98.5294117647059, Blast_Score=278, Evalue=1e-76,
Organism=Escherichia coli, GI87081931, Length=136, Percent_Identity=79.4117647058823, Blast_Score=228, Evalue=1e-61,
Organism=Escherichia coli, GI1787408, Length=129, Percent_Identity=45.7364341085271, Blast_Score=125, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009833
- ProDom:   PD021249 [H]

Pfam domain/function: PF07166 DUF1398 [H]

EC number: NA

Molecular weight: Translated: 16370; Mature: 16239

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLK
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCEEEEEECCCEEEHHHHH
KVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWVTNIHEHKRYYYAFDNS
HHHEEEECCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
LLFTESIQNTTQIFPR
EEEEHHHCHHHHCCCC
>Mature Secondary Structure 
AQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLK
CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCEEEEEECCCEEEHHHHH
KVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWVTNIHEHKRYYYAFDNS
HHHEEEECCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
LLFTESIQNTTQIFPR
EEEEHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]