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The map label for this gene is ykfJ

Identifier: 209397487

GI number: 209397487

Start: 293927

End: 294181

Strand: Direct

Name: ykfJ

Synonym: ECH74115_0280

Alternate gene names: 209397487

Gene position: 293927-294181 (Clockwise)

Preceding gene: 209399255

Following gene: 209398288

Centisome position: 5.28

GC content: 52.16

Gene sequence:

>255_bases
ATGGGCAAATATATTCGTCCCTTATCCGATGCGGTATTTACCATCGCATCTGATGACCTGTGGATCGAGAGTTTAGCGAT
CCAACAATTACACACCACGGCAAATTTACCCAACATGCAGCGCGTAGTGGGGATGCCAGATTTACACCCCGGACGCGGCT
ACCCGATTGGCGCAGCGTTCTTCTCTGTTGGTCGTTTTTACCCGACAAGACGTCGCGGTAACGGTGCTGGAAACAGAAAC
GGGCCGCTACTCTGA

Upstream 100 bases:

>100_bases
AGTGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAACGAACGCAGTCGCAGTACATGCAACTTGAAGTATGAC
GAGTATAAATGGAATGGTAC

Downstream 100 bases:

>100_bases
CACGCTGCGTTCGGCGCTGATTTCTCTGGATGGCGACAACGCATGGGCGTTAAGCGAAAGTTGGTGCGGCACTATTCAGT
GGATTTGTCTGAGTCCGTAT

Product: release factor H-coupled RctB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPTRRRGNGAGNRN
GPLL

Sequences:

>Translated_84_residues
MGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPTRRRGNGAGNRN
GPLL
>Mature_83_residues
GKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPTRRRGNGAGNRNG
PLL

Specific function: Unknown

COG id: COG1690

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKFJ_ECO57 (Q8X7P0)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D85512
- PIR:   F90661
- RefSeq:   NP_285952.1
- RefSeq:   NP_308289.1
- ProteinModelPortal:   Q8X7P0
- SMR:   Q8X7P0
- EnsemblBacteria:   EBESCT00000024119
- EnsemblBacteria:   EBESCT00000060435
- GeneID:   914358
- GeneID:   957054
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z0296
- KEGG:   ecs:ECs0262
- GeneTree:   EBGT00050000009926
- HOGENOM:   HBG468755
- OMA:   FYPARRR
- ProtClustDB:   CLSK432675
- BioCyc:   ECOL83334:ECS0262-MONOMER
- InterPro:   IPR001233

Pfam domain/function: PF01139 UPF0027; SSF103365 UPF0027

EC number: NA

Molecular weight: Translated: 9241; Mature: 9110

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAF
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHH
FSVGRFYPTRRRGNGAGNRNGPLL
HHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAF
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHH
FSVGRFYPTRRRGNGAGNRNGPLL
HHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796