| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is pntA [H]
Identifier: 209397404
GI number: 209397404
Start: 2182467
End: 2184053
Strand: Reverse
Name: pntA [H]
Synonym: ECH74115_2313
Alternate gene names: 209397404
Gene position: 2184053-2182467 (Counterclockwise)
Preceding gene: 209399051
Following gene: 209396936
Centisome position: 39.2
GC content: 52.43
Gene sequence:
>1587_bases GTGGCTCCTGACACAGGCAAACCATCATCAATAAAACCGATGGAAGGGAATATCATGCGAATTGGCATACCAAGAGAACG GTTAACCAATGAACCCCGTGTTGCAGCAACGCCAAAAACAGTGGAACAGCTGCTGAAACTGGGGTTTACCGTCGCGGTAG AGAGCGGCGCGGGTCAACTGGCAAGTTTTGACGATAAAGCGTTTGTGCAAGCGGGCGCTGAAATTGTAGAAGGGAATAGC GTCTGGCAGTCAGAGATCATTCTGAAGGTCAATGCGCCGTTAGATGATGAAATTGCGTTACTGAATCCTGGGACAACGCT GGTGAGTTTTATCTGGCCTGCGCAGAATCCGGAATTAATGCAAAAACTTGCGGAACGTAACGTGACCGTGATGGCGATGG ACTCTGTGCCGCGTATCTCACGCGCACAATCGCTGGACGCACTAAGCTCGATGGCGAATATCGCCGGTTATCGCGCCATT GTTGAAGCGGCACATGAATTTGGGTGCTTCTTTACCGGGCAAATTACTGCGGCCGGGAAAGTGCCACCGGCAAAAGTGAT GGTGATTGGTGCGGGTGTTGCAGGTCTGGCCGCCATTGGCGCAGCAAACAGTCTCGGCGCGATTGTGCGTGCATTCGACA CCCGCCCGGAAGTGAAAGAACAAGTTCAAAGTATGGGCGCGGAATTCCTCGAGCTGGATTTTAAAGAGGAAGCGGGCAGC GGCGATGGCTATGCCAAAGTGATGTCGGACGCGTTCATCAAAGCGGAAATGGAACTCTTTGCCGCCCAGGCAAAAGAGGT CGATATCATTGTCACCACCGCGCTTATTCCAGGCAAACCAGCGCCGAAGCTAATTACCCGTGAAATGGTTGACTCCATGA AGGCGGGCAGTGTGATTGTCGACCTGGCAGCCCAAAACGGCGGCAACTGTGAATACACCGTGCCGGGTGAAATCTTCACT ACGGAAAATGGTGTCAAAGTGATTGGCTATACCGATCTTCCGGGCCGTCTGCCGACGCAATCCTCACAGCTTTACGGCAC TAACCTCGTTAATCTGCTGAAACTGTTGTGCAAAGAGAAAAACGGTAACATCACTGTTGATTTTGATGATGTGGTGATTC GCGGCGTGACTGTGATCCGTGCGGGCGAAATTACCTGGCCGGCACCGCCGATTCAGGTATCAGCTCAGCCGCAGGTGGCA CAAAAAGCGGCACCGGAAGTGAAAACTGAGGAAAAATGTGCCTGTTCACCGTGGCGTAAATACGCGTTGATGGCGCTGGC AATCATCCTTTTCGGCTGGCTGGCAAGCGTTGCGCCGAAAGAGTTTCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCG TTGTCGGTTATTACGTGGTGTGGAACGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGG ATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCTTATAGC CAGCATTAATATTTTCGGTGGCTTCACCGTGACTCAGCGCATGCTGAAAATGTTCCGCAAAAATTAA
Upstream 100 bases:
>100_bases TTGGCGCTAGATCACAGGCATAATTTTCAGTACGTTATAGGGCGTTTGTTACTAATTTATTTTAACGGAGTAACATTTAG CTCGTACATGAGCGGCTTGT
Downstream 100 bases:
>100_bases GGGGTAACATATGTCTGGAGGATTAGTTACAGCTGCATACATTGTTGCCGCGATCCTGTTTATCTTCAGTCTGGCCGGGC TTTCGAAACATGAAACGTCT
Product: NAD(P) transhydrogenase subunit alpha
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha; Pyridine nucleotide transhydrogenase subunit alpha [H]
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MAPDTGKPSSIKPMEGNIMRIGIPRERLTNEPRVAATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNS VWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAI VEAAHEFGCFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGS GDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFT TENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEKNGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQVA QKAAPEVKTEEKCACSPWRKYALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISG IIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFRKN
Sequences:
>Translated_528_residues MAPDTGKPSSIKPMEGNIMRIGIPRERLTNEPRVAATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNS VWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAI VEAAHEFGCFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGS GDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFT TENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEKNGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQVA QKAAPEVKTEEKCACSPWRKYALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISG IIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFRKN >Mature_527_residues APDTGKPSSIKPMEGNIMRIGIPRERLTNEPRVAATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSV WQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIV EAAHEFGCFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSG DGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTT ENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEKNGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQVAQ KAAPEVKTEEKCACSPWRKYALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGI IVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFRKN
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=532, Percent_Identity=50.9398496240602, Blast_Score=493, Evalue=1e-139, Organism=Homo sapiens, GI122939153, Length=532, Percent_Identity=50.9398496240602, Blast_Score=493, Evalue=1e-139, Organism=Escherichia coli, GI1787887, Length=510, Percent_Identity=98.8235294117647, Blast_Score=1025, Evalue=0.0, Organism=Caenorhabditis elegans, GI17550456, Length=527, Percent_Identity=50.0948766603416, Blast_Score=481, Evalue=1e-136,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR004571 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 56401; Mature: 56270
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00836 ALADH_PNT_1 ; PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPDTGKPSSIKPMEGNIMRIGIPRERLTNEPRVAATPKTVEQLLKLGFTVAVESGAGQL CCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCC ASFDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELM CCCCCHHHHHHCHHHCCCCCEEEEEEEEEECCCCCCCEEEECCCCEEEEEECCCCCHHHH QKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGCFFTGQITAAGK HHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCC VPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGS CCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHEEECHHCCCC GDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIV CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE DLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEK EEECCCCCCCEEECCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC NGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQVAQKAAPEVKTEEKCACSPWRK CCCEEEEEHHHHEECEEEEEECCEECCCCCCEECCCCHHHHHCCCCCCCCCCCCCCHHHH YALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFRKN HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure APDTGKPSSIKPMEGNIMRIGIPRERLTNEPRVAATPKTVEQLLKLGFTVAVESGAGQL CCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCC ASFDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELM CCCCCHHHHHHCHHHCCCCCEEEEEEEEEECCCCCCCEEEECCCCEEEEEECCCCCHHHH QKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGCFFTGQITAAGK HHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCC VPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGS CCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHEEECHHCCCC GDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIV CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE DLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEK EEECCCCCCCEEECCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC NGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQVAQKAAPEVKTEEKCACSPWRK CCCEEEEEHHHHEECEEEEEECCEECCCCCCEECCCCHHHHHCCCCCCCCCCCCCCHHHH YALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFRKN HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3525165; 1633824; 9097039; 9278503; 1932078 [H]