| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is flgN [H]
Identifier: 209397144
GI number: 209397144
Start: 1432144
End: 1432560
Strand: Reverse
Name: flgN [H]
Synonym: ECH74115_1449
Alternate gene names: 209397144
Gene position: 1432560-1432144 (Counterclockwise)
Preceding gene: 209399485
Following gene: 209400380
Centisome position: 25.71
GC content: 47.96
Gene sequence:
>417_bases ATGACGCGTCTTGCAGAGATCCTCGACCAGATGTCCGCTGTGCTTAACGATCTCAAAACGGTAATGGATCAAGAGCAGCA ACATCTCTCTATGGGGCAGATCAACGGCAGCCAGTTGCAATGGATTACAGAACAAAAAAGCTCACTGCTGGCAACGTTGG ATTACCTCGAACAGTTACGCAGGAAAGAACCCAATACAGCAAATAGCGTTGATATTAGTCAACGCTGGCAGGAAATTGCT GTGAAAACGCAGCAACTACGCCAAATGAATCAACATAACGGCTGGTTACTGGAAGGACAGATTGAGCGCAATCAACAGGC GCTGGAAATGTTGAAACCGCATCAGGAACCGACGCTATATGGGGCGAACGGTCAGACCTCAACAACCCATCGCGGCAGTA AAAAGATTTCGATCTGA
Upstream 100 bases:
>100_bases AAACTGGCGATTCGTAACGGTGAACTAAAAATGGACACCGGCAAAATTGCCGATGCGCTGATCAACGAAGCGCAGCAAGA CTTGCAGAGTAATTAATCGT
Downstream 100 bases:
>100_bases AGATTATCTCCGGCCTGCACTGCAGGCCGGAATGCATTGTTACACCGTCCGGCGGGCAAATTCTTTAACTTTGAAGCCCA GTACCGCCAGTGCAGCGAAG
Product: flagella synthesis protein FlgN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLRRKEPNTANSVDISQRWQEIA VKTQQLRQMNQHNGWLLEGQIERNQQALEMLKPHQEPTLYGANGQTSTTHRGSKKISI
Sequences:
>Translated_138_residues MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLRRKEPNTANSVDISQRWQEIA VKTQQLRQMNQHNGWLLEGQIERNQQALEMLKPHQEPTLYGANGQTSTTHRGSKKISI >Mature_137_residues TRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLRRKEPNTANSVDISQRWQEIAV KTQQLRQMNQHNGWLLEGQIERNQQALEMLKPHQEPTLYGANGQTSTTHRGSKKISI
Specific function: Required for the efficient initiation of filament assembly [H]
COG id: COG3418
COG function: function code NUO; Flagellar biosynthesis/type III secretory pathway chaperone
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgN family [H]
Homologues:
Organism=Escherichia coli, GI1787310, Length=138, Percent_Identity=98.5507246376812, Blast_Score=275, Evalue=6e-76,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007809 [H]
Pfam domain/function: PF05130 FlgN [H]
EC number: NA
Molecular weight: Translated: 15867; Mature: 15736
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RKEPNTANSVDISQRWQEIAVKTQQLRQMNQHNGWLLEGQIERNQQALEMLKPHQEPTLY HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCCCEEE GANGQTSTTHRGSKKISI CCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RKEPNTANSVDISQRWQEIAVKTQQLRQMNQHNGWLLEGQIERNQQALEMLKPHQEPTLY HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCCCEEE GANGQTSTTHRGSKKISI CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]